Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05016 and RBAM_030870

See DNA alignment / Visit BSNT_05016 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05016___yvaG.1.9828.seq
#    -bsequence pep-align/RBAM_030870___yvaG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05016___yvaG-RBAM_030870___yvaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05016___yvaG-RBAM_030870___yvaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05016___yvaG
# 2: RBAM_030870___yvaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     222/265 (83.8%)
# Similarity:   236/265 (89.1%)
# Gaps:           1/265 ( 0.4%)
# Score: 1112.0
# 
#
#=======================================

BSNT_05016___      1 -MKLNLQGKTALVTGSTSGIGKAIASSLAEEGAAVIINGRREEKVNQTID     49
                      |.|.|:||||||||||||||||||:||..||||||||||||||||:||.
RBAM_030870__      1 MMDLQLKGKTALVTGSTSGIGKAIAASLIAEGAAVIINGRREEKVNETIR     50

BSNT_05016___     50 ELKTQHAEAVLYPAAFDLGTEEGCNELFQAYPEVDILVNNLGIFEPAEYF     99
                     ||:.|..:|.||||||||||.|||..:||.:|:|||||||||||||||||
RBAM_030870__     51 ELEKQTPDARLYPAAFDLGTAEGCGAIFQQHPDVDILVNNLGIFEPAEYF    100

BSNT_05016___    100 DIPDDEWFRFFEVNIMSGVRLTRRYLHNMIEKKEGRVIFIASEAAIMPSQ    149
                     ||||:||.|||||||||||||||||...|||:|||||||||||||:||||
RBAM_030870__    101 DIPDEEWLRFFEVNIMSGVRLTRRYAKRMIERKEGRVIFIASEAAVMPSQ    150

BSNT_05016___    150 EMAHYSATKTMQLSISRSLAELATGTNVTVNTVMPGSTLTEGVETMLNSL    199
                     ||||||||||.|||:|||||||..||||||||||||||.||||||||.||
RBAM_030870__    151 EMAHYSATKTTQLSLSRSLAELTEGTNVTVNTVMPGSTKTEGVETMLESL    200

BSNT_05016___    200 YPGENLTVQEAEARFMKENRPTSIIQRLIRPEEIAHFVTFLSSPLSSAIN    249
                     |||||||..|||.|||||||||||||||||||||||||.|||||||||||
RBAM_030870__    201 YPGENLTAAEAERRFMKENRPTSIIQRLIRPEEIAHFVAFLSSPLSSAIN    250

BSNT_05016___    250 GAALRADGGLVRSVF    264
                     |:|||.|||||||:.
RBAM_030870__    251 GSALRIDGGLVRSII    265


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