Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05006 and RBAM_030720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:33
# Commandline: needle
# -asequence pep-align/BSNT_05006.1.9828.seq
# -bsequence pep-align/RBAM_030720___yvaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05006-RBAM_030720___yvaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05006-RBAM_030720___yvaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05006
# 2: RBAM_030720___yvaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 142/211 (67.3%)
# Similarity: 152/211 (72.0%)
# Gaps: 55/211 (26.1%)
# Score: 759.0
#
#
#=======================================
BSNT_05006 0 -------------------------------------------------- 0
RBAM_030720__ 1 MAKVLYITAHPHDEKTSYSMATGKAFIDSYKESNPNDEVVHIDLYKENIP 50
BSNT_05006 1 -----MYLAWGKLQSGTGFEELSESEKAKVGRLGELSDQFASADKYVFVT 45
::..|||||||||||||||:||||||||.|||||||:||||||||
RBAM_030720__ 51 HIDADVFSGWGKLQSGTGFEELSENEKAKVGRLNELSDQFAAADKYVFVT 100
BSNT_05006 46 PLWNFSFPPVMKAYLDSVAVAGKSFKYTEQGPIGLLTDKKAIHIQARGGY 95
|||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_030720__ 101 PLWNFSFPPVMKAYLDSVAVAGKSFKYTEQGPIGLLTDKKALHIQARGGY 150
BSNT_05006 96 YSEGPAAEMEMGHRYIGIMMNFFGVPSFEGIFVEGHNAEPDKAQQIKEDA 145
|||||||:||||||||||||||||||||:|:.||||||||:|||||||||
RBAM_030720__ 151 YSEGPAADMEMGHRYIGIMMNFFGVPSFDGLIVEGHNAEPNKAQQIKEDA 200
BSNT_05006 146 IARAKEAGKTF 156
|||||||||:|
RBAM_030720__ 201 IARAKEAGKSF 211
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