Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05003 and RBAM_030690

See DNA alignment / Visit BSNT_05003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:33
# Commandline: needle
#    -asequence pep-align/BSNT_05003___yvgY.1.9828.seq
#    -bsequence pep-align/RBAM_030690___copZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05003___yvgY-RBAM_030690___copZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05003___yvgY-RBAM_030690___copZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05003___yvgY
# 2: RBAM_030690___copZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      56/74 (75.7%)
# Similarity:    61/74 (82.4%)
# Gaps:           6/74 ( 8.1%)
# Score: 285.0
# 
#
#=======================================

BSNT_05003___      1 -----MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS     45
                          ||||||||||||||||||||||.||||:||:||.|.||||:|||:
RBAM_030690__      1 MEGIIMEQKTLQVEGMSCQHCVKAVETGVGELNGVTAVQVKLEAGQVDVT     50

BSNT_05003___     46 FDADKVSVKDIADAIEDQGYDVAE     69
                     ||.:||||.||.||||||||||. 
RBAM_030690__     51 FDENKVSVSDIKDAIEDQGYDVV-     73


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