Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05003 and RBAM_030690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:33
# Commandline: needle
# -asequence dna-align/BSNT_05003___yvgY.1.9828.seq
# -bsequence dna-align/RBAM_030690___copZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05003___yvgY-RBAM_030690___copZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05003___yvgY-RBAM_030690___copZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05003___yvgY
# 2: RBAM_030690___copZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 162/225 (72.0%)
# Similarity: 162/225 (72.0%)
# Gaps: 18/225 ( 8.0%)
# Score: 630.0
#
#
#=======================================
BSNT_05003___ 1 ---------------ATGGAACAAAAAACATTGCAAGTTGAAGGAATGTC 35
|||||||||||||||.|||||||.|||||.|||||
RBAM_030690__ 1 GTGGAGGGAATTATCATGGAACAAAAAACACTGCAAGTCGAAGGCATGTC 50
BSNT_05003___ 36 TTGTCAGCACTGCGTCAAAGCAGTAGAAACAAGCGTAGGAGAACTGGACG 85
.||||||||||||||||||||||||||.||..|.||||||||||||.|||
RBAM_030690__ 51 ATGTCAGCACTGCGTCAAAGCAGTAGAGACCGGAGTAGGAGAACTGAACG 100
BSNT_05003___ 86 GCGTCAGTGCCGTTCATGTCAATCTGGAAGCGGGTAAAGTCGATGTTTCG 135
|.||.|..||.|||||.||.||..|||||||.||..|.||.|||||..||
RBAM_030690__ 101 GAGTGACGGCGGTTCAGGTGAAATTGGAAGCCGGACAGGTGGATGTGACG 150
BSNT_05003___ 136 TTTGATGCTGACAAAGTATCAGTCAAAGATATTGCGGATGCGATAGAAGA 185
|||||||...|||||||.||.||...||||||....||.|||||.|||||
RBAM_030690__ 151 TTTGATGAGAACAAAGTCTCCGTATCAGATATAAAAGACGCGATTGAAGA 200
BSNT_05003___ 186 TCAGGGCTATGACGTAGCTGAGTGA 210
|||.||.||||||||.|...||
RBAM_030690__ 201 TCAAGGGTATGACGTCGTATAG--- 222
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