Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04992 and RBAM_030630
See
DNA alignment /
Visit
BSNT_04992 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence pep-align/BSNT_04992___yvgT.1.9828.seq
# -bsequence pep-align/RBAM_030630___yvgT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04992___yvgT-RBAM_030630___yvgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04992___yvgT-RBAM_030630___yvgT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04992___yvgT
# 2: RBAM_030630___yvgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 192/203 (94.6%)
# Similarity: 199/203 (98.0%)
# Gaps: 1/203 ( 0.5%)
# Score: 992.0
#
#
#=======================================
BSNT_04992___ 1 MAWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLL 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_030630__ 1 MAWELLSVIGIIAFAVSGAIVAMEEEYDILGVYILGIVTAFGGGAIRNLL 50
BSNT_04992___ 51 IGVPVSALWEQGAYFQIALLSITIVFLFPKLLLKHWNKWGNLSDAIGLAA 100
|||||||||||||:|||||.|:|||||||||||:||:|||||||||||:|
RBAM_030630__ 51 IGVPVSALWEQGAFFQIALTSVTIVFLFPKLLLRHWSKWGNLSDAIGLSA 100
BSNT_04992___ 101 FAIQGALYAVKMGHPLSAVIVAAVLTGSGGGIIRDLLAGRKPLVLKAEIY 150
||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_030630__ 101 FAIQGALYAVKMGHPLSAVIAAAVLTGSGGGIIRDLLAGRKPLVLKAEIY 150
BSNT_04992___ 151 AVWAALGGLIVGLGWLGNSFGLYVLFFVLVVCRVCSYMFNWKLPNRSFRL 200
|||||||||||||||||||||||||||||||||||||||.|:||||||||
RBAM_030630__ 151 AVWAALGGLIVGLGWLGNSFGLYVLFFVLVVCRVCSYMFKWQLPNRSFRL 200
BSNT_04992___ 201 DSQ 203
|:
RBAM_030630__ 201 DN- 202
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.