Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04992 and RBAM_030630
See
Amino acid alignment /
Visit
BSNT_04992 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence dna-align/BSNT_04992___yvgT.1.9828.seq
# -bsequence dna-align/RBAM_030630___yvgT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04992___yvgT-RBAM_030630___yvgT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04992___yvgT-RBAM_030630___yvgT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04992___yvgT
# 2: RBAM_030630___yvgT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 613
# Identity: 516/613 (84.2%)
# Similarity: 516/613 (84.2%)
# Gaps: 5/613 ( 0.8%)
# Score: 2181.0
#
#
#=======================================
BSNT_04992___ 1 ATGGCTTGGGAGCTGCTCAGTGTGATTGGCATCATTGCGTTTGCAGTCAG 50
|||||.|||||||||||.|||||.||.|||||||||||||||||.|||||
RBAM_030630__ 1 ATGGCCTGGGAGCTGCTTAGTGTAATCGGCATCATTGCGTTTGCGGTCAG 50
BSNT_04992___ 51 CGGCGCAATTGTTGCGATGGAAGAGGAATATGATATTTTAGGAGTTTATA 100
|||.||.||||||||||||||||||||.||||||||||||||.||.||||
RBAM_030630__ 51 CGGAGCGATTGTTGCGATGGAAGAGGAGTATGATATTTTAGGCGTGTATA 100
BSNT_04992___ 101 TATTAGGGATTGTCACCGCTTTTGGAGGAGGAGCGATCCGCAATTTGCTG 150
|.||.||||||||.||.||.||.||.||||||||||||||.|||.|||||
RBAM_030630__ 101 TCTTGGGGATTGTAACGGCGTTCGGCGGAGGAGCGATCCGAAATCTGCTG 150
BSNT_04992___ 151 ATCGGAGTTCCGGTGTCAGCGCTATGGGAGCAGGGAGCGTACTTTCAAAT 200
|||||.||||||||.||.||..|.||||||||.||.||||..||||||||
RBAM_030630__ 151 ATCGGTGTTCCGGTCTCCGCCTTGTGGGAGCAAGGCGCGTTTTTTCAAAT 200
BSNT_04992___ 201 CGCGCTTTTATCTATTACAATTGTGTTTCTGTTTCCGAAGCTGCTGCTGA 250
|||.||...|||..||||.|||||.|||.|||||||||||||||||.|.|
RBAM_030630__ 201 CGCTCTCACATCAGTTACGATTGTCTTTTTGTTTCCGAAGCTGCTGTTAA 250
BSNT_04992___ 251 AGCATTGGAATAAGTGGGGCAATTTATCAGATGCGATCGGCCTCGCTGCC 300
.||||||||.|||.||||||||..||||.|||||.|||||.||..|.||.
RBAM_030630__ 251 GGCATTGGAGTAAATGGGGCAACCTATCCGATGCCATCGGGCTTTCGGCG 300
BSNT_04992___ 301 TTTGCTATCCAAGGCGCACTGTATGCTGTCAAAATGGGCCATCCGCTTAG 350
|||||.|||||||||||..|.|||||.||.|||||||||||||||||.||
RBAM_030630__ 301 TTTGCCATCCAAGGCGCTTTATATGCCGTGAAAATGGGCCATCCGCTCAG 350
BSNT_04992___ 351 TGCCGTGATCGTGGCTGCGGTGCTGACGGGAAGCGGGGGCGGAATCATCC 400
|||.|||||.|.|||.|||||.|||||.||.|||||||||||.|||||.|
RBAM_030630__ 351 TGCGGTGATTGCGGCAGCGGTCCTGACCGGCAGCGGGGGCGGCATCATAC 400
BSNT_04992___ 401 GCGACCTTCTTGCCGGGC-GCAAACCGCTTGTGCTGAAGGCAGAAATTTA 449
|.||..|.||.| ||||| |.||.|||||||||||.|||||.||||||||
RBAM_030630__ 401 GGGATTTGCTCG-CGGGCAGGAAGCCGCTTGTGCTCAAGGCGGAAATTTA 449
BSNT_04992___ 450 TGCAGTCTGGGCGGCTCTCGGCGGTTTAATCGTCGGCTTGGGCTGGCTGG 499
||||||||||||.||.|||||.||.|||||||||||||||||||||||||
RBAM_030630__ 450 TGCAGTCTGGGCCGCGCTCGGAGGGTTAATCGTCGGCTTGGGCTGGCTGG 499
BSNT_04992___ 500 GGAACTCGTTCGGCTTATACGTTCTGTTTTTCGTGCTCGTTGTTTGCCGG 549
|.||.|||||.||.||.||||||||||||||||||||.|||||||||||.
RBAM_030630__ 500 GAAATTCGTTTGGGTTGTACGTTCTGTTTTTCGTGCTTGTTGTTTGCCGC 549
BSNT_04992___ 550 GTTTGTTCCTATATGTTTAATTGGAAGCTGCCAAACCGTTCTTTTCGCTT 599
||||||||||||||||||||.|||.||||||||||||||||||||||.||
RBAM_030630__ 550 GTTTGTTCCTATATGTTTAAGTGGCAGCTGCCAAACCGTTCTTTTCGTTT 599
BSNT_04992___ 600 AGATAGTCAGTAA 612
||||| |.|||
RBAM_030630__ 600 AGATA---ACTAA 609
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.