Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04981 and RBAM_030570

See DNA alignment / Visit BSNT_04981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence pep-align/BSNT_04981___yvgN.1.9828.seq
#    -bsequence pep-align/RBAM_030570___yvgN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04981___yvgN-RBAM_030570___yvgN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04981___yvgN-RBAM_030570___yvgN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04981___yvgN
# 2: RBAM_030570___yvgN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     238/276 (86.2%)
# Similarity:   253/276 (91.7%)
# Gaps:          16/276 ( 5.8%)
# Score: 1259.0
# 
#
#=======================================

BSNT_04981___      1 ----------------MPWFGLGVFKVENGNEATESVKAAIKNGYRSIDT     34
                                     ||||||||||||||:.|.:||:|||:||||||||
RBAM_030570__      1 MAKSLKDTVKLHNGVEMPWFGLGVFKVENGSVAADSVEAAIRNGYRSIDT     50

BSNT_04981___     35 AAIYKNEEGVGIGIKESGVAREELFITSKVWNEEQGYETTLAAFEKSLER     84
                     |||||||||||.||:.:||||||||||||||||:|||||||.||||||||
RBAM_030570__     51 AAIYKNEEGVGEGIRAAGVAREELFITSKVWNEDQGYETTLDAFEKSLER    100

BSNT_04981___     85 LQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEE    134
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_030570__    101 LGLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEE    150

BSNT_04981___    135 LLKDAEIKPMVNQVEFHPRLTQKELRDYCKAQGIQLEAWSPLMQGQLLDN    184
                     |||||||||||||:||||||||||:||:|||||||:||||||||||||||
RBAM_030570__    151 LLKDAEIKPMVNQIEFHPRLTQKEVRDFCKAQGIQVEAWSPLMQGQLLDN    200

BSNT_04981___    185 EVLTQIAEKHNKSVAQVILRWDLQHEVVTIPKSIKEHRIIENADIFDFEL    234
                     |||:||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_030570__    201 EVLSQIAEKHNKSVAQVILRWDLQNEVVTIPKSIKEHRIIENADIFDFEL    250

BSNT_04981___    235 SQEDMDKIDALNKDERVGPNPDELLF    260
                     |||:|:||.|||||||||||||||||
RBAM_030570__    251 SQEEMEKISALNKDERVGPNPDELLF    276


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