Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04979 and RBAM_030510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence pep-align/BSNT_04979.1.9828.seq
# -bsequence pep-align/RBAM_030510___yvgM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04979-RBAM_030510___yvgM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04979-RBAM_030510___yvgM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04979
# 2: RBAM_030510___yvgM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 154/227 (67.8%)
# Similarity: 168/227 (74.0%)
# Gaps: 41/227 (18.1%)
# Score: 792.0
#
#
#=======================================
BSNT_04979 1 MALLPSSISASEFFTPVALSFQVAAVAGIVVIILGTLAGAWMSRASFFGK 50
|::|.|.||
RBAM_030510__ 1 -----------------------------------------MAKARFPGK 9
BSNT_04979 51 TALETCFMLPLVLPPTVVGFILIVIFGKHSFIGQAIEWIFQQPVIFTWWA 100
||:||.|||||||||||||||||:|||||||||:.||.||.|||||||.|
RBAM_030510__ 10 TAVETLFMLPLVLPPTVVGFILIIIFGKHSFIGRTIERIFHQPVIFTWSA 59
BSNT_04979 101 AVIASAVVAFPLMYQSAKTGFADIDPDIQGAAMVDGASRWKVFIHISVPL 150
||||||:|||||||||||||||.:|.||:|||.||||.||:||..|||||
RBAM_030510__ 60 AVIASAIVAFPLMYQSAKTGFAAVDADIEGAAKVDGAGRWQVFTRISVPL 109
BSNT_04979 151 AYPSLLTGSILSLARALGEFGATLMFAGNIPGVTQTLPTAIYVALDSGNN 200
|:||||||||||:|||||||||||||||||||||||||||||||:||||.
RBAM_030510__ 110 AFPSLLTGSILSIARALGEFGATLMFAGNIPGVTQTLPTAIYVAMDSGNE 159
BSNT_04979 201 TLAWAWVVCIVVISFLMLFFIQQKKTH 227
||||.||:|||:||||||||||.||..
RBAM_030510__ 160 TLAWGWVICIVIISFLMLFFIQLKKPA 186
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