Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04976 and RBAM_030480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:30
# Commandline: needle
# -asequence pep-align/BSNT_04976___yvgJ.1.9828.seq
# -bsequence pep-align/RBAM_030480___yvgJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04976___yvgJ-RBAM_030480___yvgJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04976___yvgJ-RBAM_030480___yvgJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04976___yvgJ
# 2: RBAM_030480___yvgJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity: 462/618 (74.8%)
# Similarity: 524/618 (84.8%)
# Gaps: 1/618 ( 0.2%)
# Score: 2455.0
#
#
#=======================================
BSNT_04976___ 1 MKGTFFHNQRFLCFSILFMWIKTYVIYKLGFDLQIDTLLEELMLLVNPLS 50
||.|||.|.||||.||||||:|||.:||||||||.:::|||.:||:||||
RBAM_030480__ 1 MKKTFFSNHRFLCLSILFMWMKTYAVYKLGFDLQNNSVLEECLLLINPLS 50
BSNT_04976___ 51 FILPLFGIGLLLKGNKQRAFLLIANLVLTVILISNTIFYGFYIDFITIPV 100
||:|||||.|||...|||.|||.||::||.|||:||:|||||||||||||
RBAM_030480__ 51 FIVPLFGIALLLTEKKQRIFLLSANVMLTGILIANTVFYGFYIDFITIPV 100
BSNT_04976___ 101 LFQASNMSDMGSSVKELFHPLFIALFVDLVFLLLFARKTKHPQTKAAPRT 150
|||||||.||||||:||||||:||||:|:..|....::.|..:.||:.||
RBAM_030480__ 101 LFQASNMGDMGSSVQELFHPLYIALFLDIAVLFYLGKRHKAGKGKASTRT 150
BSNT_04976___ 151 IKRYYAASCGMLLCTLALAEVQQPKLLAHSFDREMLVKSIGLFQFHIYDT 200
:|.|..||.|::||.|||:|.:||||..|.||||.|||.||||.||:|||
RBAM_030480__ 151 VKAYAWASAGLMLCNLALSEAEQPKLFKHPFDREALVKGIGLFHFHLYDT 200
BSNT_04976___ 201 ISQTVNISAKAFADEDSITAIKNYTEADYSKPDQSKFGLAKGRNVIFVTL 250
||||:|..|||||||||:.|:.|||:||||:|.:||||||||||||||||
RBAM_030480__ 201 ISQTLNAGAKAFADEDSLAAVANYTQADYSRPSESKFGLAKGRNVIFVTL 250
BSNT_04976___ 251 ESTQSFVLNEKVNGKEITPFMNDLIKKSYSFDHFYQQTEQGKTSDSEFIV 300
||||.||::|:|||:|||||:|.|.||||.|.|||||||||||||||||.
RBAM_030480__ 251 ESTQRFVMDERVNGREITPFLNKLRKKSYDFTHFYQQTEQGKTSDSEFIT 300
BSNT_04976___ 301 ANSLYPSLSGAVFFTKSDHQFYTMYKSLKQHDYYSAVFHANHKTFWNRDV 350
|||||||.|||||||||.|:|.|||..||...|||||.|||||.|||||.
RBAM_030480__ 301 ANSLYPSSSGAVFFTKSGHRFNTMYHMLKDRQYYSAVLHANHKAFWNRDE 350
BSNT_04976___ 351 MYDTFGIDRFFDVDDFHVTPGTSTSWGLKDKEFLEQSAEKLKSLPQPFYS 400
||..||||||||.|:|.||...||.|||||||||||||||||.||||||:
RBAM_030480__ 351 MYGAFGIDRFFDADEFKVTQENSTGWGLKDKEFLEQSAEKLKKLPQPFYA 400
BSNT_04976___ 401 SFITLTNHFPFEIDEKDQLIDEFDSSSDLLNRYVTTVRYEDEALKHFIKK 450
|.:|||||||||||::||||:|.|:||:|||||||||||||||||||.||
RBAM_030480__ 401 SLLTLTNHFPFEIDKQDQLIEEPDTSSELLNRYVTTVRYEDEALKHFFKK 450
BSNT_04976___ 451 LKDEGLYENSMIVFMGDHYGISEAHNEAMAEFLRKDEITPYDNVQLQRVP 500
||.||||:|:|||.||||||||||||:.:||||.|:||||:|.|||||||
RBAM_030480__ 451 LKKEGLYDNAMIVLMGDHYGISEAHNQGLAEFLGKEEITPFDTVQLQRVP 500
BSNT_04976___ 501 FIIHIPGITDQQPETIPDAGGQVDVRPTLMHLLGVETKGDIQFGNDLLSG 550
|||||||:||:.||||..|.|||||||||:||||:||||.|||||||.||
RBAM_030480__ 501 FIIHIPGVTDRAPETIASAAGQVDVRPTLLHLLGIETKGSIQFGNDLFSG 550
BSNT_04976___ 551 DRTPFAVLRNGSFITNDYIYTKNTCYSQKTGEVLEDQDACLPYKEKANEE 600
:||||||||||||||:|:|||||||||:||||.|.|..||...||||.:|
RBAM_030480__ 551 ERTPFAVLRNGSFITDDHIYTKNTCYSRKTGEPLSDMSACSDEKEKAEQE 600
BSNT_04976___ 601 LSLSDKILNGDLLRFSE- 617
|.|||||||||||||.:
RBAM_030480__ 601 LMLSDKILNGDLLRFYKQ 618
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