Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04975 and RBAM_030470

See DNA alignment / Visit BSNT_04975 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence pep-align/BSNT_04975___yvsG.1.9828.seq
#    -bsequence pep-align/RBAM_030470___yvsG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04975___yvsG-RBAM_030470___yvsG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04975___yvsG-RBAM_030470___yvsG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04975___yvsG
# 2: RBAM_030470___yvsG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     132/160 (82.5%)
# Similarity:   148/160 (92.5%)
# Gaps:           0/160 ( 0.0%)
# Score: 712.0
# 
#
#=======================================

BSNT_04975___      1 MTGKTHIMGGIASCTAAAYYYGFDPVLMAASGAVGALIPDICHTQSKIGR     50
                     ||||||||||||||:|.|||||:|||||.::||:||||||||||:|||||
RBAM_030470__      1 MTGKTHIMGGIASCSAIAYYYGYDPVLMTSAGALGALIPDICHTKSKIGR     50

BSNT_04975___     51 KFPILSKVVSSVFGHRTFTHSLLFMLIMFFITSTYIPDKNISAGLMIGMA    100
                     ..|:|||:||:|||||||||||||||||||||:||||:.:||||||||||
RBAM_030470__     51 TLPVLSKIVSTVFGHRTFTHSLLFMLIMFFITATYIPNPSISAGLMIGMA    100

BSNT_04975___    101 SHLILDAWTVNGIKLLFPSTIRVRLPLYMKTGSFSEQLVLAGLTLASCYY    150
                     |||:|||||||||||||||.||.||||||:||||||||||||||:.||||
RBAM_030470__    101 SHLVLDAWTVNGIKLLFPSAIRFRLPLYMRTGSFSEQLVLAGLTIVSCYY    150

BSNT_04975___    151 FYMLFHGRMF    160
                     .|.|.|||:.
RBAM_030470__    151 LYELVHGRIS    160


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