Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04975 and RBAM_030470

See Amino acid alignment / Visit BSNT_04975 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence dna-align/BSNT_04975___yvsG.1.9828.seq
#    -bsequence dna-align/RBAM_030470___yvsG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04975___yvsG-RBAM_030470___yvsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04975___yvsG-RBAM_030470___yvsG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04975___yvsG
# 2: RBAM_030470___yvsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 486
# Identity:     364/486 (74.9%)
# Similarity:   364/486 (74.9%)
# Gaps:           6/486 ( 1.2%)
# Score: 1315.0
# 
#
#=======================================

BSNT_04975___      1 ATGACAGGAAAAACACACATCATGGGAGGCATCGCTTCTTGTACGGCAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||.|.|||..
RBAM_030470__      1 ATGACAGGAAAAACACACATCATGGGAGGCATCGCTTCTTGTTCCGCAAT     50

BSNT_04975___     51 GGCTTATTATTATGGATTTGATCCAGTGCTTATGGCTGCGTCAGGCGCGG    100
                     .||.||||||||.||.|.||||||.||.||||||.|..|..|.||.||..
RBAM_030470__     51 TGCGTATTATTACGGGTATGATCCGGTCCTTATGACCTCAGCGGGTGCCC    100

BSNT_04975___    101 TTGGAGCATTAATACCCGATATCTGCCACACACAAAGCAAAATCGGGAGA    150
                     |.||.||..|.||.|||||.||.|||||.||..|||||||||||||.||.
RBAM_030470__    101 TCGGGGCGCTGATTCCCGACATATGCCATACGAAAAGCAAAATCGGCAGG    150

BSNT_04975___    151 AAATTTCCTATTTTATCGAAAGTGGTCAGCTCCGTTTTTGGCCATCGCAC    200
                     |...|.||..||.|.||.|||.|.||.|||.|.||.||.|||||..|.||
RBAM_030470__    151 ACGCTGCCCGTTCTGTCCAAAATCGTAAGCACGGTGTTCGGCCACAGAAC    200

BSNT_04975___    201 ATTTACACACAGCTTGCTGTTTATGCTCATCATGTTTTTTATCACTTCTA    250
                     .||||||||||||.|||||||||||||.||.||||||||.||.||..|.|
RBAM_030470__    201 GTTTACACACAGCCTGCTGTTTATGCTTATTATGTTTTTCATTACGGCAA    250

BSNT_04975___    251 CATACATTCCAGATAAAAACATATCAGCCGGCCTGATGATCGGAATGGCG    300
                     |.||.|||||..||...|.|||.||.|||||.||||||||||||||||||
RBAM_030470__    251 CCTATATTCCGAATCCGAGCATTTCCGCCGGACTGATGATCGGAATGGCG    300

BSNT_04975___    301 AGCCA-CTTGATTCTTGACGCTTGGACGGTGAACGGAATCAAATTATTAT    349
                     ||||| |||| |.||||||||.|||||.||.|||||.||.|||.|..|.|
RBAM_030470__    301 AGCCATCTTG-TGCTTGACGCATGGACCGTCAACGGCATTAAACTGCTGT    349

BSNT_04975___    350 TCCCTTCAACGATCCGCGTTCGGCTTCCATTATATATGAAGACAGGCAGT    399
                     |.||.||..|.||||||.|.||.||.||..|.|||||||..||.||.|||
RBAM_030470__    350 TTCCGTCCGCCATCCGCTTCCGTCTGCCCCTTTATATGAGAACGGGGAGT    399

BSNT_04975___    400 TTTTCTGAGCAGCTCGTGCTAGCCGGCCTGACCCTTGCTTCATGTTACTA    449
                     |||||.||||||||.|||||.||||||.|.||..|||..||.||.||.||
RBAM_030470__    400 TTTTCGGAGCAGCTTGTGCTGGCCGGCTTAACGATTGTATCCTGCTATTA    449

BSNT_04975___    450 CTTTTATATG--CTGTTTCATGGGCGCATGTTTTAA    483
                       ||||||.|  |||.||||.||.|||||.|.||||
RBAM_030470__    450 --TTTATACGAACTGGTTCACGGCCGCATCTCTTAA    483


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