Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04967 and RBAM_030430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:30
# Commandline: needle
# -asequence pep-align/BSNT_04967___fhuB.1.9828.seq
# -bsequence pep-align/RBAM_030430___fhuB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04967___fhuB-RBAM_030430___fhuB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04967___fhuB-RBAM_030430___fhuB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04967___fhuB
# 2: RBAM_030430___fhuB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 275/403 (68.2%)
# Similarity: 312/403 (77.4%)
# Gaps: 52/403 (12.9%)
# Score: 1416.5
#
#
#=======================================
BSNT_04967___ 1 MIIPLQVPVDTIFLQMHFHFCSKHSIKSAEKSDILKQQLIIIISNRKEVR 50
:.
RBAM_030430__ 1 ------------------------------------------------ML 2
BSNT_04967___ 51 QLSQHKNIQTA----SEEIQWTSRTYGAVIVLIAGLCLLCLGAFLSISLG 96
.|.:.|...|| ..|||||:|::.|.::|.||:.:|.:||.||:|:|
RBAM_030430__ 3 GLLKKKQTMTAQGASGSEIQWTARSFRAAVLLCAGIAVLLIGAALSVSIG 52
BSNT_04967___ 97 AADIHLRTVWDAIFYFKPTKTSHQIIHDLRLPRTAAAALVGALLAVSGAI 146
||||||||||||:|:|:|..||||||.|||||||||||||||.|||||||
RBAM_030430__ 53 AADIHLRTVWDALFHFQPQNTSHQIIRDLRLPRTAAAALVGAFLAVSGAI 102
BSNT_04967___ 147 MQGMTRNPLAEPSIMGVTSGSAFAVSIAFAFFPGLSAMGLVLWSFAGAGL 196
|||:|||||||||||||||||.||:::||||||||||.|||||||||||:
RBAM_030430__ 103 MQGLTRNPLAEPSIMGVTSGSGFAIALAFAFFPGLSAAGLVLWSFAGAGI 152
BSNT_04967___ 197 GASTVMGIGLFSRGGLTPVKLALAGTAVTYFFTGISTAIAIRFDVAQDIS 246
||..|.||||||:|||||||||||||||.||.||:|:|||||||||||:.
RBAM_030430__ 153 GALIVFGIGLFSKGGLTPVKLALAGTAVGYFLTGLSSAIAIRFDVAQDVK 202
BSNT_04967___ 247 FWYAGGVAGVKWPGVQLLFIAGAVGLTLAFFIARSVTVLSLGDDLAKGLG 296
||||||||.|||.|||||...|.:||.|||.|||||||||||::||||||
RBAM_030430__ 203 FWYAGGVASVKWEGVQLLLAVGVIGLLLAFLIARSVTVLSLGEELAKGLG 252
BSNT_04967___ 297 QYTSAVKLVGMLIVVILTGAAVSIAGTIAFIGLIIPHITRFLVGVDYRWI 346
||||.||::||.:||:||||:||:||.|:||||:||||||||||||||||
RBAM_030430__ 253 QYTSLVKVIGMFVVVLLTGASVSVAGAISFIGLVIPHITRFLVGVDYRWI 302
BSNT_04967___ 347 IPCSAVLGAVLLVFADIAARLVNAPFETPVGALTSLIGVPFFFYLARRER 396
||||||.|||||||:|||||||||||||||||||:|||||||||||||||
RBAM_030430__ 303 IPCSAVFGAVLLVFSDIAARLVNAPFETPVGALTALIGVPFFFYLARRER 352
BSNT_04967___ 397 RGL 399
|||
RBAM_030430__ 353 RGL 355
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