Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04964 and RBAM_030410

See DNA alignment / Visit BSNT_04964 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_04964___fhuC.1.9828.seq
#    -bsequence pep-align/RBAM_030410___fhuC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04964___fhuC-RBAM_030410___fhuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04964___fhuC-RBAM_030410___fhuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04964___fhuC
# 2: RBAM_030410___fhuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     226/269 (84.0%)
# Similarity:   248/269 (92.2%)
# Gaps:           2/269 ( 0.7%)
# Score: 1163.0
# 
#
#=======================================

BSNT_04964___      1 MNSLSTEQLGIGYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMS     50
                     |||||.|||.:|||||:|.::|:|:|||||||||||||||||||:|||||
RBAM_030410__      1 MNSLSAEQLTVGYGDRLIAKELDIAIPKGKITTLIGPNGCGKSTVLKTMS     50

BSNT_04964___     51 RIMRSHAGAVYLNGKAIHKMSTKDIAKDMAILPQTPEAPSGLTVHELVSY    100
                     |||:..:|||||||:||.:.|||||||:||||||||||||||||:|||||
RBAM_030410__     51 RIMKPKSGAVYLNGQAIMQKSTKDIAKEMAILPQTPEAPSGLTVYELVSY    100

BSNT_04964___    101 GRFPHQSGFGRLNDEDRRIIKWALEETGMAEYAERPIEALSGGQRQRVWI    150
                     ||||||||.|||:|:||.:||||||||||||:.:||||||||||||||||
RBAM_030410__    101 GRFPHQSGMGRLSDKDRDMIKWALEETGMAEFYDRPIEALSGGQRQRVWI    150

BSNT_04964___    151 AMALAQGTELLLLDEPTTYLDLAHQLEILQLLDRLNKEQGRTILMVIHDL    200
                     ||||||.||||||||||||||||||||||||||:||||||||||||||||
RBAM_030410__    151 AMALAQETELLLLDEPTTYLDLAHQLEILQLLDKLNKEQGRTILMVIHDL    200

BSNT_04964___    201 NHAARFSHYMIALKKGTVIKEGTALEVMTPDILKQVFQIDAEIVTDPRTN    250
                     ||||||||||||||||.|||||||.|||||.|||.||||||:||.|||||
RBAM_030410__    201 NHAARFSHYMIALKKGRVIKEGTAEEVMTPGILKDVFQIDAQIVKDPRTN    250

BSNT_04964___    251 KPVCLTYDLIKNEKELVTV    269
                     ||||||||||::|...|  
RBAM_030410__    251 KPVCLTYDLIRHENATV--    267


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