Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04964 and RBAM_030410

See Amino acid alignment / Visit BSNT_04964 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence dna-align/BSNT_04964___fhuC.1.9828.seq
#    -bsequence dna-align/RBAM_030410___fhuC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04964___fhuC-RBAM_030410___fhuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04964___fhuC-RBAM_030410___fhuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04964___fhuC
# 2: RBAM_030410___fhuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 820
# Identity:     623/820 (76.0%)
# Similarity:   623/820 (76.0%)
# Gaps:          26/820 ( 3.2%)
# Score: 2304.0
# 
#
#=======================================

BSNT_04964___      1 ATGAATTCATTATCAACGGAACAGCTTGGAATCGGTTATGGCGACAGGGT     50
                     |||||.||||||||..|||||||||||....||||||||||||||.|..|
RBAM_030410__      1 ATGAACTCATTATCGGCGGAACAGCTTACTGTCGGTTATGGCGACCGTTT     50

BSNT_04964___     51 GATTGTAGAGGATTTAAATATATCGATTCCTAAAGGGAAAATTACCACCT    100
                     |||.|...|.||.||..||||..|.||.||.|||||.||||||||.||..
RBAM_030410__     51 GATAGCGAAAGAATTGGATATCGCCATCCCGAAAGGAAAAATTACAACGC    100

BSNT_04964___    101 TAATTGGCCCGAACGGCTGCGGGAAATCAACGATTTTAAAAACAATGTCC    150
                     |.||.||.||||||||||||||.|||||.|||.||.|.|||||.|||||.
RBAM_030410__    101 TGATCGGTCCGAACGGCTGCGGAAAATCGACGGTTCTCAAAACGATGTCA    150

BSNT_04964___    151 AGAATTATG----CGTTCACATGCAGGTGCCGTCTATTTAAACGGCAAAG    196
                     |||||.|||    ||   |.|| |.||.|||||||||||||||||..|.|
RBAM_030410__    151 AGAATCATGAAACCG---AAAT-CCGGCGCCGTCTATTTAAACGGACAGG    196

BSNT_04964___    197 CGATTCAT---AAAATGTCTACAAAGGACATTGCAAAAGATATGGCGATT    243
                     ||| ||||   ||||  ||.||.||.|||||.||.||.||.|||||.|||
RBAM_030410__    197 CGA-TCATGCAAAAA--TCCACGAAAGACATCGCCAAGGAAATGGCAATT    243

BSNT_04964___    244 CTTCCACAGACACCTGAAGCGCCGAGCGGCCTAACAGTGCACGAATTGGT    293
                     |||||.|||||.|||||||||||||||||.||.||.|||.|||||.|.||
RBAM_030410__    244 CTTCCGCAGACGCCTGAAGCGCCGAGCGGGCTGACGGTGTACGAACTTGT    293

BSNT_04964___    294 GTCGTACGGCAGGTTTCCGCATCAATCAGGATTCGGCAGATTAAATGACG    343
                     .||.||||||||||||||||||||.||.|||.|.|||.|.||.|.|||..
RBAM_030410__    294 TTCTTACGGCAGGTTTCCGCATCAGTCCGGAATGGGCCGTTTGAGTGATA    343

BSNT_04964___    344 AAGACCGCCGGATTATCAAATGGGCGCTTGAAGAAACAGGCATGGCTGAA    393
                     |||||||....||.||||||||||||||.|||||.||.||.|||||.|||
RBAM_030410__    344 AAGACCGTGACATGATCAAATGGGCGCTGGAAGAGACGGGGATGGCCGAA    393

BSNT_04964___    394 TATGCTGAACGGCCGATTGAGGCATTGTCAGGCGGACAGCGTCAACGTGT    443
                     |.|...||.||||||||.||.||..|.||.||.||.|||||.||.|||||
RBAM_030410__    394 TTTTACGACCGGCCGATCGAAGCGCTTTCCGGGGGGCAGCGGCAGCGTGT    443

BSNT_04964___    444 GTGGATTGCCATGGCGCTTGCGCAAGGGACGGAACTGCTTCTGCTGGATG    493
                     ||||||.|||||||||||.||.||||..|||||.|||||.||.||.||||
RBAM_030410__    444 GTGGATCGCCATGGCGCTCGCTCAAGAAACGGAGCTGCTGCTTCTTGATG    493

BSNT_04964___    494 AACCTACAACGTATCTTGATCTTGCACATCAGCTTGAAATTCTGCAGCTG    543
                     |.||.||.||.|||.|.|||||.||.|||||||||||||||.||||||||
RBAM_030410__    494 AGCCGACCACTTATTTAGATCTCGCCCATCAGCTTGAAATTTTGCAGCTG    543

BSNT_04964___    544 CTTGACAGACTCAACAAAGAGCAAGGGCGGACGATTTTAATGGTCATTCA    593
                     ||.||||.|.|.|||||.|||||.||.||.||.|||||||||||||||||
RBAM_030410__    544 CTGGACAAATTAAACAAGGAGCAGGGCCGTACCATTTTAATGGTCATTCA    593

BSNT_04964___    594 TGATCTTAACCATGCAGCTCGTTTTTCTCATTATATGATCGCGCTCAAAA    643
                     ||||||.||||||||.||.||||||||.|||||.||||||||.||.||||
RBAM_030410__    594 TGATCTGAACCATGCCGCCCGTTTTTCCCATTACATGATCGCCCTGAAAA    643

BSNT_04964___    644 AAGGCACG-GTCATCAAGGAAGGAACTGCTCTGGAGGTCATGACACCGGA    692
                     |||| .|| |||||||||||||||||.||...|||.||||||||.||.|.
RBAM_030410__    644 AAGG-GCGCGTCATCAAGGAAGGAACGGCGGAGGAAGTCATGACTCCCGG    692

BSNT_04964___    693 CAT-TTTAAAGCAGGTATTTCAGATTGATGCCGAAATCGTGACTGATCCC    741
                     ||| ||.|||| |.||.||.||.|||||.||..|.||.||.|..|||||.
RBAM_030410__    693 CATATTGAAAG-ACGTTTTCCAAATTGACGCACAGATTGTAAAAGATCCG    741

BSNT_04964___    742 CGTACAAATAAACCTGTATGCTTGACATATGACTTGATTAAAAATGAAAA    791
                     ||.||.||.|||||.||.|||||.||.||.||.||.||.....|||||||
RBAM_030410__    742 CGCACGAACAAACCGGTCTGCTTAACCTACGATTTAATCCGGCATGAAAA    791

BSNT_04964___    792 AG-AGCTAGTTACTGTATGA    810
                     .| |       ||.||||||
RBAM_030410__    792 CGCA-------ACGGTATGA    804


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