Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04956 and RBAM_030390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence pep-align/BSNT_04956___oxdC.1.9828.seq
# -bsequence pep-align/RBAM_030390___oxdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04956___oxdC-RBAM_030390___oxdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04956___oxdC-RBAM_030390___oxdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04956___oxdC
# 2: RBAM_030390___oxdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 341/388 (87.9%)
# Similarity: 362/388 (93.3%)
# Gaps: 5/388 ( 1.3%)
# Score: 1844.5
#
#
#=======================================
BSNT_04956___ 1 MKKQN--DIPQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNM 48
|.|:| :|||||||||||||.||||:||||||||||.|||||||||.||
RBAM_030390__ 1 MSKENNCNIPQPIRGDKGATVTIPRNLERDRQNPDMLTPPETDHGTVDNM 50
BSNT_04956___ 49 KFSFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLKPGAIRELHWHK 98
||||||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_030390__ 51 KFSFSDVHNRLEKGGYAREVTVRELPISENLASVNMRLKPGAIRELHWHK 100
BSNT_04956___ 99 EAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEG 148
|||||||:.|.||||||||:||||||||.||||||||||||||||||:||
RBAM_030390__ 101 EAEWAYMLTGKARVTIVDEQGRSFIDDVKEGDLWYFPSGLPHSIQALKEG 150
BSNT_04956___ 149 AEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEIANLPGKE 198
.||||||||||||||||||:||||||||.:|||:||||:::::|.|||||
RBAM_030390__ 151 CEFLLVFDDGSFSENSTFQVTDWLAHTPLDVIASNFGVSEKDLAGLPGKE 200
BSNT_04956___ 199 KYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEP-IESEGGNVYIAD 247
|||||..:||.||||||||||||||||||||||::.| .|::||.|||||
RBAM_030390__ 201 KYIFEEPVPGKLKDDIVEGPNGEVPYPFTYRLLDEGPTAETDGGKVYIAD 250
BSNT_04956___ 248 STNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD 297
|||||||||||||||.|||||||||||||||||||||||||.||||||||
RBAM_030390__ 251 STNFKVSKTIASALVVVEPGAMRELHWHPNTHEWQYYISGKGRMTVFASD 300
BSNT_04956___ 298 GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQ 347
||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_030390__ 301 GHARTFNYQAGDVGYVPFAMGHYVENLGDEPLVFLEIFKDDHYADVSLNQ 350
BSNT_04956___ 348 WLAMLPETFVQAHLDLGKDFTDVLSKEKHPVVKKKCSK 385
|||||||.|||.||||||||||:|||||||||||||
RBAM_030390__ 351 WLAMLPEKFVQQHLDLGKDFTDILSKEKHPVVKKKC-- 386
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