Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04954 and RBAM_030380

See DNA alignment / Visit BSNT_04954 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_04954.1.9828.seq
#    -bsequence pep-align/RBAM_030380.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04954-RBAM_030380.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04954-RBAM_030380.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: RBAM_030380
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 51
# Identity:      44/51 (86.3%)
# Similarity:    45/51 (88.2%)
# Gaps:           1/51 ( 2.0%)
# Score: 218.0
# 
#
#=======================================

BSNT_04954         1 MDQVFIEEVVKQIGNLGFPALIAMYLLTRFEKKFDQLIELMTELKDHAKK     50
                     ||||||||.|:||||||||||||||||||||||||.||||||||||...|
RBAM_030380        1 MDQVFIEEAVRQIGNLGFPALIAMYLLTRFEKKFDALIELMTELKDQKMK     50

BSNT_04954        50 -     50
                      
RBAM_030380       51 N     51


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