Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04954 and RBAM_030380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence dna-align/BSNT_04954.1.9828.seq
# -bsequence dna-align/RBAM_030380.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04954-RBAM_030380.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04954-RBAM_030380.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: RBAM_030380
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity: 125/158 (79.1%)
# Similarity: 125/158 (79.1%)
# Gaps: 7/158 ( 4.4%)
# Score: 498.5
#
#
#=======================================
BSNT_04954 1 ATGGATCAGGTTTTTATAGAGGAAGTCGTAAAACAGATCGGCAATTTGGG 50
||||||||||||||||||||.||||..||.|.|||||||||||||.|.||
RBAM_030380 1 ATGGATCAGGTTTTTATAGAAGAAGCGGTCAGACAGATCGGCAATCTCGG 50
BSNT_04954 51 GTTTCCCGCGCTGATTGCAATGTATCTGCTGACCCGATTCGAAAAGAAGT 100
.|||||.||.||||||||.||||||||.||.||.||.||.||.|||||||
RBAM_030380 51 CTTTCCGGCTCTGATTGCCATGTATCTTCTCACACGGTTTGAGAAGAAGT 100
BSNT_04954 101 TTGATCAACTAATAGAACTAATGACAGAACTGAAAGATC-----ATGCAA 145
||||....||.||.|||||.|||||.||||||||||||| ||| |
RBAM_030380 101 TTGACGCCCTGATCGAACTGATGACGGAACTGAAAGATCAAAAAATG--A 148
BSNT_04954 146 AAAAATAA 153
||||.|||
RBAM_030380 149 AAAATTAA 156
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