Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04952 and RBAM_030370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence pep-align/BSNT_04952___yvrI.1.9828.seq
# -bsequence pep-align/RBAM_030370___yvrI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04952___yvrI-RBAM_030370___yvrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04952___yvrI-RBAM_030370___yvrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04952___yvrI
# 2: RBAM_030370___yvrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 150/212 (70.8%)
# Similarity: 171/212 (80.7%)
# Gaps: 20/212 ( 9.4%)
# Score: 794.0
#
#
#=======================================
BSNT_04952___ 1 MDYQSLLRSKCKEIMKHPIVKHFLSNPQHYRLFKNVMESPNEKDAKSLDE 50
||||.||||||||||||||||||||:|:||..||||:|..:||||||||:
RBAM_030370__ 1 MDYQVLLRSKCKEIMKHPIVKHFLSDPKHYEKFKNVLEHSDEKDAKSLDD 50
BSNT_04952___ 51 LFKQFYKEIRIVKYMNSMIRIFSIDFDKRVRKNQKRYPLTVDHPEAGDRL 100
.||||||||||:|||||||||||||||||:||||||||||||.||.|:.|
RBAM_030370__ 51 HFKQFYKEIRIIKYMNSMIRIFSIDFDKRIRKNQKRYPLTVDQPEGGEAL 100
BSNT_04952___ 101 PSETGSDAFEEFLDRQDDLSQHVQDYQLYQAIQKLTDKQKSVLTKVYLHG 150
|.|.|.||:||||.:|.|||||||:..||:|:|.||||||||||.:||||
RBAM_030370__ 101 PYEMGKDAYEEFLRKQGDLSQHVQNRDLYEALQTLTDKQKSVLTNIYLHG 150
BSNT_04952___ 151 ATMQEIADSLGESRQNISNIHKKGLENIRKQLAAQKRGKSKLWTASLNKK 200
|||:|||:|||||||||||||||||:|:||||..||:|::|.
RBAM_030370__ 151 ATMKEIAESLGESRQNISNIHKKGLDNLRKQLDKQKKGENKQ-------- 192
BSNT_04952___ 201 RNKKTRLMTLSI 212
RBAM_030370__ 192 ------------ 192
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