Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04951 and RBAM_030360

See DNA alignment / Visit BSNT_04951 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_04951.1.9828.seq
#    -bsequence pep-align/RBAM_030360___yvrH2.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04951-RBAM_030360___yvrH2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04951-RBAM_030360___yvrH2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04951
# 2: RBAM_030360___yvrH2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 78
# Identity:      43/78 (55.1%)
# Similarity:    51/78 (65.4%)
# Gaps:          26/78 (33.3%)
# Score: 234.0
# 
#
#=======================================

BSNT_04951         1 --------------------------MIRKKLSNTSYQEREDLEQELKIK     24
                                               ||:|||||||||||||||||||||
RBAM_030360__      1 MNGPFDFNKENTDTDEMELLISRFSPMIKKKLSNTSYQEREDLEQELKIK     50

BSNT_04951        25 MFEKADMLLCQDVPGFWEFILYMVDENS     52
                     :.|||||||||:|||||||||::::|:|
RBAM_030360__     51 IVEKADMLLCQEVPGFWEFILHLINESS     78


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