Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04951 and RBAM_030360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence dna-align/BSNT_04951.1.9828.seq
# -bsequence dna-align/RBAM_030360___yvrH2.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04951-RBAM_030360___yvrH2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04951-RBAM_030360___yvrH2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04951
# 2: RBAM_030360___yvrH2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity: 123/241 (51.0%)
# Similarity: 123/241 (51.0%)
# Gaps: 86/241 (35.7%)
# Score: 454.5
#
#
#=======================================
BSNT_04951 0 -------------------------------------------------- 0
RBAM_030360__ 1 GTGAACGGGCCATTTGACTTCAACAAAGAGAACACAGATACCGACGAAAT 50
BSNT_04951 1 ----------------------------ATGATCAGAAAAAAACTCAGCA 22
|||||.|.|||||||||.||||
RBAM_030360__ 51 GGAACTTTTGATTTCGCGTTTTTCGCCAATGATAAAAAAAAAACTGAGCA 100
BSNT_04951 23 ATACGTCCTATCAAGAAAGAGAAGATTTAGAGCAAGAGCTGAAGATCAAA 72
||||.||.||.||.||||||||||||.|.||.|||||..|||||||.|||
RBAM_030360__ 101 ATACATCATACCAGGAAAGAGAAGATCTTGAACAAGAATTGAAGATTAAA 150
BSNT_04951 73 ATGTTTGAAAAGGCTGATATGCTTTTGTGTCAGGATGTCCCGGGATTTTG 122
||..|||||||.||.||.|||||.||.||.|||||.||.|||||.|||||
RBAM_030360__ 151 ATAGTTGAAAAAGCGGACATGCTGTTATGCCAGGAAGTGCCGGGTTTTTG 200
BSNT_04951 123 GGAGTTTAT--TTTGTACA--TGGTAGATGAGAACTCATAA 159
|||.||||| || || |..||.||||.|.|||.|.|
RBAM_030360__ 201 GGAATTTATACTT----CATCTTATAAATGAAAGCTCCTGA 237
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