Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04946 and RBAM_030330

See DNA alignment / Visit BSNT_04946 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:29
# Commandline: needle
#    -asequence pep-align/BSNT_04946___yvrE.1.9828.seq
#    -bsequence pep-align/RBAM_030330___yvrE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04946___yvrE-RBAM_030330___yvrE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04946___yvrE-RBAM_030330___yvrE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04946___yvrE
# 2: RBAM_030330___yvrE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     228/292 (78.1%)
# Similarity:   260/292 (89.0%)
# Gaps:           0/292 ( 0.0%)
# Score: 1238.0
# 
#
#=======================================

BSNT_04946___      1 MDAVLEADTRAVIGEGPLWDEENGRLYWVDILGSELHIFDPEEKINRSIK     50
                     |:|.|.||||||||||||||::...|||||||||:||||.|.:.||||:|
RBAM_030330__      1 MEAALRADTRAVIGEGPLWDKDKQCLYWVDILGSQLHIFTPADGINRSVK     50

BSNT_04946___     51 FKSFVTALAKYSKDELIMTMKDGFYLYHLRDDSLEKIKQPKDMHESLRFN    100
                     |||||||||.|||:||:||||||||||:||:|:|.|:||||||.|.:|||
RBAM_030330__     51 FKSFVTALALYSKEELVMTMKDGFYLYNLREDTLTKMKQPKDMREDIRFN    100

BSNT_04946___    101 DAKCDPYGRLWAGTTSMEGEQKQASLYRLNLDGSLVKIKDQVSTSNGLDW    150
                     ||||||.||||||||||||::::|||||||.||||.||||||||||||||
RBAM_030330__    101 DAKCDPSGRLWAGTTSMEGKEEEASLYRLNTDGSLAKIKDQVSTSNGLDW    150

BSNT_04946___    151 DRERNLMYYIDTPTQEIVRYSYDPQSGDVSNPEPVYRFDQSDGLPDGMTI    200
                     ||:|||||||||||||||.|:|||::|.||:|:.||||.:|.|.||||||
RBAM_030330__    151 DRDRNLMYYIDTPTQEIVCYAYDPETGAVSDPKTVYRFPESQGSPDGMTI    200

BSNT_04946___    201 DQNGMLWVALFGGSRVVHIDPFQKKEINSISVPAKYVTCCAFGGRDLKTL    250
                     |::||||||||||.|.|.||||..|||.||.||||||||||||||||.||
RBAM_030330__    201 DRDGMLWVALFGGGRAVRIDPFLHKEIASIEVPAKYVTCCAFGGRDLNTL    250

BSNT_04946___    251 YITTATEQMTEKERYEQPHAGGLFSAQLETGGYQPVPFAGDV    292
                     |||||||::||.||.|||||||||||:|||||::||||||.:
RBAM_030330__    251 YITTATEKLTEAERLEQPHAGGLFSAELETGGWEPVPFAGMM    292


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