Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04937 and RBAM_030280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:28
# Commandline: needle
# -asequence pep-align/BSNT_04937___yvqK.1.9828.seq
# -bsequence pep-align/RBAM_030280___yvqK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04937___yvqK-RBAM_030280___yvqK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04937___yvqK-RBAM_030280___yvqK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04937___yvqK
# 2: RBAM_030280___yvqK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 142/205 (69.3%)
# Similarity: 155/205 (75.6%)
# Gaps: 16/205 ( 7.8%)
# Score: 702.0
#
#
#=======================================
BSNT_04937___ 1 ------------MKLYTKTGDKGQTGLVGGRTDKDSLRVESYGTIDELNS 38
|||||||||||||.|:||||||||||||||||||||||
RBAM_030280__ 1 MCKSGGRRRNTTMKLYTKTGDKGQTSLIGGRTDKDSLRVESYGTIDELNS 50
BSNT_04937___ 39 FIGLALAELSGQLGFEDLTAELLTIQHELFDCGGDLAIVTERKDYKLTEE 88
|||||||||.......|:.|||..|||||||||||||.|||.:.|.|.|.
RBAM_030280__ 51 FIGLALAELDDCENCGDVKAELRNIQHELFDCGGDLATVTEHRSYTLRET 100
BSNT_04937___ 89 SVSFLETRIDAYTAEAPELKKFILPGGSKGASLLHIARTITRRAERRVVA 138
|:|.||..||.||||||.|:|||||||.|.|:.||||||:||||||.||.
RBAM_030280__ 101 SISALEDCIDRYTAEAPPLEKFILPGGHKAAAQLHIARTVTRRAERLVVK 150
BSNT_04937___ 139 LMKSEEIHETVLRYLNRLSDYFFAAARVVNARSGIGDVEYERSAIVFRDR 188
|.|:|||::||:|||||||||||||||.||||.|:.|:||||||.||||.
RBAM_030280__ 151 LGKTEEINDTVMRYLNRLSDYFFAAARAVNARQGVQDIEYERSAAVFRDD 200
BSNT_04937___ 189 NSSES 193
.
RBAM_030280__ 201 E---- 201
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