Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04935 and RBAM_030270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:28
# Commandline: needle
# -asequence pep-align/BSNT_04935___yvqJ.1.9828.seq
# -bsequence pep-align/RBAM_030270___yvqJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04935___yvqJ-RBAM_030270___yvqJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04935___yvqJ-RBAM_030270___yvqJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04935___yvqJ
# 2: RBAM_030270___yvqJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity: 330/422 (78.2%)
# Similarity: 375/422 (88.9%)
# Gaps: 0/422 ( 0.0%)
# Score: 1729.0
#
#
#=======================================
BSNT_04935___ 1 MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKGAIGT 50
|....:|:|||.:||..||.||:||:|||.|||||||||||:||:|||||
RBAM_030270__ 1 MDTYNKSESIWNKNFTLLFISRLVKLSGDGFAFNSILWFLIFDGEGAIGT 50
BSNT_04935___ 51 ALLIAVTFLPEAVLAPVTGPFMKQTTLKFWMYFSDLTRAAIVLIIPLCHF 100
:|||||||||||:|||:|||||||.|||||||||||||||:|||||:|:|
RBAM_030270__ 51 SLLIAVTFLPEAMLAPITGPFMKQHTLKFWMYFSDLTRAAVVLIIPVCYF 100
BSNT_04935___ 101 AGFSPLWFVMTLMIVHSATGAAYNPASIALIPQIVNEQGIQKANAVLQSS 150
.|||||||||.|||||||||||||||||:|||.||.|..:||||||:|||
RBAM_030270__ 101 NGFSPLWFVMLLMIVHSATGAAYNPASISLIPNIVGESSLQKANAVIQSS 150
BSNT_04935___ 151 AQIVRLGAVTLCGAFLTFISPSYTMLIALVLYLVSGFLVLFIKYTAVESQ 200
.|||||.|:||.|.|||||||:|::.|||:.||:|||||||:.|....::
RBAM_030270__ 151 GQIVRLAAITLSGVFLTFISPAYSLFIALIFYLLSGFLVLFMSYQVQHAK 200
BSNT_04935___ 201 SESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMNFAAAPWEALS 250
.:...|.|||||.|||||||.|||||||||||||||||||||||||||||
RBAM_030270__ 201 QDPVAVRQRGTYFGRLKRGFVLVRKHQILYPLAIYCIFMNFAAAPWEALS 250
BSNT_04935___ 251 AVYVAEDLNGEPIVYSLLKATTAGGAFLLGFVLAKVKVNRYGLLFVTAGI 300
|||||||||..||:|||||||..|||||:||:|||||||:||||||:|||
RBAM_030270__ 251 AVYVAEDLNMPPIIYSLLKATGTGGAFLMGFILAKVKVNKYGLLFVSAGI 300
BSNT_04935___ 301 IEGFAFFITGMNTFLPLVFFAAFTFGAAVSAVNVPEYTIIQTSVDSEDQP 350
|||.||||||:||||||||.|||.||:||||:|||||||||||||.:|||
RBAM_030270__ 301 IEGAAFFITGLNTFLPLVFLAAFAFGSAVSAINVPEYTIIQTSVDHDDQP 350
BSNT_04935___ 351 QVYAVIHMISNISIPAGAVICGYAANAFGSGTVIAAGGIVEIIAGIGILL 400
|||||||||||||||.|||:|||||||||.|.||||||:||:::|:|||.
RBAM_030270__ 351 QVYAVIHMISNISIPLGAVLCGYAANAFGPGKVIAAGGLVEVLSGLGILF 400
BSNT_04935___ 401 FTKLAKAERSDLIKEREASVHL 422
|||||||||||||:|:|||:.:
RBAM_030270__ 401 FTKLAKAERSDLIREKEASIRI 422
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