Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04933 and RBAM_030260

See DNA alignment / Visit BSNT_04933 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:28
# Commandline: needle
#    -asequence pep-align/BSNT_04933___yvqI.1.9828.seq
#    -bsequence pep-align/RBAM_030260___yvqI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04933___yvqI-RBAM_030260___yvqI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04933___yvqI-RBAM_030260___yvqI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04933___yvqI
# 2: RBAM_030260___yvqI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:      83/126 (65.9%)
# Similarity:    98/126 (77.8%)
# Gaps:           0/126 ( 0.0%)
# Score: 445.0
# 
#
#=======================================

BSNT_04933___      1 MKINKKTIGGFLLIVFGISVFFGGGSFGFIIPLAIGSLMTYAGVKRFAAG     50
                     |.||.||.|||||||||:|||||||.|.||||||||.||.|.|:|||:.|
RBAM_030260__      1 MNINGKTAGGFLLIVFGLSVFFGGGHFAFIIPLAIGGLMLYWGIKRFSKG     50

BSNT_04933___     51 KTITGIIVGGIGAIMLICSLPFVVGIALAAAMVYYGWKLMKNGSADNGVS    100
                     :.::|||.|.|||::|:.||||:|.|.||.||||:|||:||.|.:|....
RBAM_030260__     51 RAVSGIIAGVIGAMILVGSLPFIVAIGLAGAMVYFGWKMMKQGGSDTASR    100

BSNT_04933___    101 SFDPEPASAAYQSHFDDEWEEFLKKK    126
                     .::||.||..|||.||.|||||||||
RBAM_030260__    101 QYEPEAASPGYQSGFDSEWEEFLKKK    126


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