Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04923 and RBAM_030200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence pep-align/BSNT_04923___gerAC.1.9828.seq
# -bsequence pep-align/RBAM_030200___gerAC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04923___gerAC-RBAM_030200___gerAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04923___gerAC-RBAM_030200___gerAC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04923___gerAC
# 2: RBAM_030200___gerAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 217/373 (58.2%)
# Similarity: 288/373 (77.2%)
# Gaps: 5/373 ( 1.3%)
# Score: 1160.5
#
#
#=======================================
BSNT_04923___ 1 MKIRILCMFICTLLLSGCWDSENIEELSLVIGVGLDKPDDENLELTQQIL 50
||..|: :.:|||||:|||||.|:|:||||||||||||::||:|:|||||
RBAM_030200__ 1 MKTYIV-IILCTLLLAGCWDSRNLEDLSLVIGVGLDKPEEENVEVTQQIL 49
BSNT_04923___ 51 VPKKIS--EGSSSDPTQLSITKGETVHQMMRTSALKHNPTFLQHLRLILL 98
||:|.| :.||.:.|:::.|.||||||.:||::||::|.|.||||::|.
RBAM_030200__ 50 VPQKASSQQSSSGNTTKVTSTPGETVHQALRTASLKNHPAFSQHLRIMLF 99
BSNT_04923___ 99 SKNVIADQIGTDAIINQFVRDNGTRRSSYVFITNGRTKDIFNMNDEDEPA 148
|:.::.|.|..||::|||:||||||||..|.....:|||||.::|:.|||
RBAM_030200__ 100 SEALLKDHIPLDALMNQFIRDNGTRRSCNVMTVPDKTKDIFKISDQGEPA 149
BSNT_04923___ 149 SNVIYDLTENNKVTIRMMEPVTLGEISEHLTSDDSFLIPHVGKENGKLAI 198
||.||||||||.||||||.|||||||||.:...::|.:|.|.:...:|.|
RBAM_030200__ 150 SNTIYDLTENNSVTIRMMAPVTLGEISEKIAKGETFALPQVRQVGSRLEI 199
BSNT_04923___ 199 NGASIIKNKLWHGDLTPIEVQNINLFSGNVEGGVIDLKRDGHLFSYKVYS 248
.||:|||||.|:.:|||::|||:|||:|.|:|||...|.|.|..|::|:|
RBAM_030200__ 200 WGATIIKNKFWYANLTPLQVQNMNLFTGTVKGGVTFAKHDNHYLSFEVFS 249
BSNT_04923___ 249 SNRKIKTAYKDGKFKFTVTRTIEGRLSEDWNPSEDSFKDSYIKSIEKTVE 298
|...:||.||:|||||.|||.:||||||||||.|||||:|||..|:..|:
RBAM_030200__ 250 SKYNVKTKYKNGKFKFIVTRFVEGRLSEDWNPKEDSFKESYINEIKNAVK 299
BSNT_04923___ 299 KQVHKTVTTFITEKLQKEIKADVTGLGNQVRIHYPQKWKKISRKWDDDYF 348
:.:|..|..|| :.:|.|:|.|:||||:|||||||.||||||..| |.:|
RBAM_030200__ 300 RSIHSDVMAFI-DYMQHELKVDITGLGDQVRIHYPDKWKKISSDW-DHHF 347
BSNT_04923___ 349 SNAEIDYRVNVIVRDFGTKGANK 371
|.::|:|:|.|.:|||||||.::
RBAM_030200__ 348 SESDIEYKVKVAIRDFGTKGMSQ 370
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