Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04921 and RBAM_030180
See
DNA alignment /
Visit
BSNT_04921 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence pep-align/BSNT_04921___gerAA.1.9828.seq
# -bsequence pep-align/RBAM_030180___gerAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04921___gerAA-RBAM_030180___gerAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04921___gerAA-RBAM_030180___gerAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04921___gerAA
# 2: RBAM_030180___gerAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 374/482 (77.6%)
# Similarity: 432/482 (89.6%)
# Gaps: 2/482 ( 0.4%)
# Score: 1947.0
#
#
#=======================================
BSNT_04921___ 1 MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSELTD 50
|.|:|||||||.|||||||.:::|||||:|||||.|||||||:|.||:.|
RBAM_030180__ 1 MAQSEFKEYIHVNLALVLPHVEQNDDLVQNKKMLPNGLVFYYMYLSEMND 50
BSNT_04921___ 51 ENKVSEAIKTLIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNC 100
|:|:.|||:||:::|:|||||.|.||||::|||||.|:|:.:.|||.|.|
RBAM_030180__ 51 EDKIKEAIETLLQEEDTLTLDTVTKRLDKIDARPVFTSKEAVISILRGKC 100
BSNT_04921___ 101 AVFINGLDKAYILTTGKKKTRSLTEPTTEIVVRGPKVAFVEDIDTNLALI 150
||||||||..|||:|||::.||:.|||:|.||||||:||:||.|||:|:|
RBAM_030180__ 101 AVFINGLDSVYILSTGKREKRSVNEPTSEKVVRGPKIAFIEDSDTNVAMI 150
BSNT_04921___ 151 RQRTSHPKLITKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQL 200
||||:||||.|||:.|||||||.|.:|||:.||..||:.:|..||..:::
RBAM_030180__ 151 RQRTNHPKLKTKKVPIGENKLKYATVMYIDDKADPSVVSDVVKRLSEVKM 200
BSNT_04921___ 201 EDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNGRVAILVDGSP 250
:||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_030180__ 201 DDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNGRVAILVDNSP 250
BSNT_04921___ 251 FVLLVPVSLGILMQSPDDYYERWISASLIRSLRYASIFITLFLSSIYIAL 300
|.|:||.|||||||||||||||||||||||.||:.|||||||.|||||||
RBAM_030180__ 251 FALVVPASLGILMQSPDDYYERWISASLIRVLRFTSIFITLFFSSIYIAL 300
BSNT_04921___ 301 VSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPN 350
||||||||||:|||||:|||||||||||.||::||:|||||||||||||:
RBAM_030180__ 301 VSFHQGLLPTSLAVTIAANRENVPFPPIIEAMVMEITIELLREAGLRLPS 350
BSNT_04921___ 351 PLGQTIGLVGGVVIGQAAVEANLVSSIMVIVVSVIALASFTVPQYGMGLS 400
||||||||||||||||||||||:||||||||||::|||||||||||||||
RBAM_030180__ 351 PLGQTIGLVGGVVIGQAAVEANIVSSIMVIVVSIVALASFTVPQYGMGLS 400
BSNT_04921___ 401 FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSL 450
||||||||||:||..||||:|||||.:||||:||.|||||||||||||||
RBAM_030180__ 401 FRVLRFISMFTAAAFGLYGMILFMLAIYTHLSRQRSFGSPYFSPNGFFSL 450
BSNT_04921___ 451 KNTDDSIIRLPIKNKPKEANNPNEPKTDSTET 482
||.:|||:||||||:||||.|.|||:.:|.
RBAM_030180__ 451 KNANDSILRLPIKNQPKEAKNVNEPENNSQ-- 480
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.