Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04916 and RBAM_030140

See DNA alignment / Visit BSNT_04916 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_04916___yirB.1.9828.seq
#    -bsequence pep-align/RBAM_030140___yirB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04916___yirB-RBAM_030140___yirB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04916___yirB-RBAM_030140___yirB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04916___yirB
# 2: RBAM_030140___yirB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 54
# Identity:      47/54 (87.0%)
# Similarity:    52/54 (96.3%)
# Gaps:           0/54 ( 0.0%)
# Score: 263.0
# 
#
#=======================================

BSNT_04916___      1 MRELDEMISRLRNRGIKVEKVKYPKQTLSEKKWVHQCKQPLKTNYRDFNG     50
                     |:|||||||||||||||||||||||:|:.||||||||::|||.|||||||
RBAM_030140__      1 MKELDEMISRLRNRGIKVEKVKYPKKTICEKKWVHQCQKPLKANYRDFNG     50

BSNT_04916___     51 YSFT     54
                     ||||
RBAM_030140__     51 YSFT     54


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