Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04911 and RBAM_030110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:26
# Commandline: needle
# -asequence pep-align/BSNT_04911___yvtA.1.9828.seq
# -bsequence pep-align/RBAM_030110___yvtA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04911___yvtA-RBAM_030110___yvtA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04911___yvtA-RBAM_030110___yvtA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04911___yvtA
# 2: RBAM_030110___yvtA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 353/459 (76.9%)
# Similarity: 392/459 (85.4%)
# Gaps: 7/459 ( 1.5%)
# Score: 1747.0
#
#
#=======================================
BSNT_04911___ 1 -MDYRRDGQNDQHQTEPSHTEQQNTENQKLIGHSEQELLDVPVSYEAGRQ 49
.|:|.||:: :.|::.|||||...|.|: |.|.|.|||:.|||.|| ..
RBAM_030110__ 1 MNDHRDDGRS-RDQSDLSHTEQNRNEQQQ-ISHQEPELLEGPVSKEA-EN 47
BSNT_04911___ 50 ETASALEMEKQETAVKKEKKRRAAWLSPILGGIIGGGLMLGIAPYLPSDQ 99
|.|:..|.|| ..|||||||||||||||||||||||||:|||.|.||.:|
RBAM_030110__ 48 EMAAGTEFEK-TAAVKKEKKRRAAWLSPILGGIIGGGLVLGIVPNLPGEQ 96
BSNT_04911___ 100 NQATETASANKQVQSDNFTTAPITNASNIADMVEDLEPTIVGISNIQTSQ 149
:: ||..|..|||||.|||:.|:.|.|::|||||||||.|||:||.|.||
RBAM_030110__ 97 HK-TEAVSDTKQVQSSNFTSTPLKNTSSVADMVEDLEPAIVGVSNYQASQ 145
BSNT_04911___ 150 NNTFGTGGGSSSESESGTGSGVIFKKDSNKAYIITNNHVVEGANKLTVTL 199
::.||..||||||:|||||||||||||..|||||||||||||||||:|||
RBAM_030110__ 146 SSQFGLDGGSSSETESGTGSGVIFKKDGEKAYIITNNHVVEGANKLSVTL 195
BSNT_04911___ 200 YNGETETAKLVGSDTITDLAVLEISSKNVKKVASFGDSSQLRTGEKVIAI 249
|||:||||||||.|.|:|||||||||.||||.|||||||:||..:|||||
RBAM_030110__ 196 YNGKTETAKLVGKDAISDLAVLEISSSNVKKAASFGDSSKLRIADKVIAI 245
BSNT_04911___ 250 GNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAINPGNSG 299
|||||||||||||||:|||||||:|.||:||||||||:||||||||||||
RBAM_030110__ 246 GNPLGQQFSGTVTQGVISGLNRTVDADTSQGTVEMNVIQTDAAINPGNSG 295
BSNT_04911___ 300 GPLINASGQVIGINSLKVSENGVESLGFAIPSNDVEPIVDQLLQNGKVDR 349
|||||:|||||||||:|||||||||||||||||||||||||||..|||:|
RBAM_030110__ 296 GPLINSSGQVIGINSMKVSENGVESLGFAIPSNDVEPIVDQLLAKGKVER 345
BSNT_04911___ 350 PFLGVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANSPAEKAGIK 399
||||||||||:||||||||||||||||||.|||||||||:.|||.|||||
RBAM_030110__ 346 PFLGVQMIDMAQVPETYQENTLGLFGDQLSKGVYVKEVQSGSPAAKAGIK 395
BSNT_04911___ 400 SEDVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLRKGKTKTLNATL 449
|.||||:||||||.||||||||||..||:|||||:||||.|..||||.||
RBAM_030110__ 396 SNDVIVQLNGKDVGSSADIRQILYNQLKIGDKTTVQVLRSGSKKTLNVTL 445
BSNT_04911___ 450 TKQTESSSS 458
||||||:|
RBAM_030110__ 446 TKQTESAS- 453
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