Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04909 and RBAM_030100

See DNA alignment / Visit BSNT_04909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_04909___mrgA.1.9828.seq
#    -bsequence pep-align/RBAM_030100___mrgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04909___mrgA-RBAM_030100___mrgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04909___mrgA-RBAM_030100___mrgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04909___mrgA
# 2: RBAM_030100___mrgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     117/156 (75.0%)
# Similarity:   131/156 (84.0%)
# Gaps:           3/156 ( 1.9%)
# Score: 621.0
# 
#
#=======================================

BSNT_04909___      1 --MKTENAKTNQTLVENSLNTQLSNWFLLYSKLHRFHWYVKGPHFFTLHE     48
                       |.|:|||..:||||.|:||||||||:||||||||||||||||||||||
RBAM_030100__      1 MNMNTQNAKKTETLVEKSMNTQLSNWFILYSKLHRFHWYVKGPHFFTLHE     50

BSNT_04909___     49 KFEELYDYAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSAS     98
                     ||||||:.||||.|.||||||||||||.||:..|.|.|||||.|.|.:||
RBAM_030100__     51 KFEELYNEAAETADAIAERLLAIGGQPAATLHAYLEQASITDEGQEKTAS    100

BSNT_04909___     99 EMVQALVNDYKQISSESKFVIGLAEENQDNATADLFVGLIEEVEKQVWML    148
                     |||::||.||||||.|||||||:|||..|.:||||||||:||.:|.||||
RBAM_030100__    101 EMVESLVQDYKQISRESKFVIGIAEEQNDPSTADLFVGLVEEADKHVWML    150

BSNT_04909___    149 SSYLG-    153
                     |:||| 
RBAM_030100__    151 SAYLGE    156


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