Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04909 and RBAM_030100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:26
# Commandline: needle
# -asequence dna-align/BSNT_04909___mrgA.1.9828.seq
# -bsequence dna-align/RBAM_030100___mrgA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04909___mrgA-RBAM_030100___mrgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04909___mrgA-RBAM_030100___mrgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04909___mrgA
# 2: RBAM_030100___mrgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity: 354/477 (74.2%)
# Similarity: 354/477 (74.2%)
# Gaps: 21/477 ( 4.4%)
# Score: 1327.5
#
#
#=======================================
BSNT_04909___ 1 ------ATGAAAACTGAAAACGCAAAAACAAATCAAACATTAGTTGAGAA 44
|||||.||..|||||||.||||.||.|.||||..|.||||||||
RBAM_030100__ 1 ATGAATATGAATACACAAAACGCGAAAAAAACTGAAACTCTTGTTGAGAA 50
BSNT_04909___ 45 TTCACTGAACACACAATTATCAAACTGGTTTCTTTTATACTCTAAGCTCC 94
.|||.||||||||||||||||||||||||||.|..|.||||||||.||.|
RBAM_030100__ 51 ATCAATGAACACACAATTATCAAACTGGTTTATCCTTTACTCTAAACTGC 100
BSNT_04909___ 95 ACCGTTTCCATTGGTATGTGAAAGGGCCTCATTTCTTTACATTGCACGAG 144
||||.||||||||||||||.|||||.||.||.||||||||..|.||.||.
RBAM_030100__ 101 ACCGCTTCCATTGGTATGTAAAAGGCCCGCACTTCTTTACGCTTCATGAA 150
BSNT_04909___ 145 AAATTTGAAGAACTTTATGACTATGCGGCTGAAACAGTGGATACCATCGC 194
||||||||||||||.|||.||.|.|||||.|||||.|.||||.|||||||
RBAM_030100__ 151 AAATTTGAAGAACTGTATAACGAAGCGGCGGAAACGGCGGATGCCATCGC 200
BSNT_04909___ 195 TGAGCGCCTGCTGGCGATTGGCGGACAGCCTGTTGCCACAGTGAAAGAAT 244
.|||||.||.|||||.||.|||||||||||||..||.||..|..|.|..|
RBAM_030100__ 201 AGAGCGACTTCTGGCCATCGGCGGACAGCCTGCGGCGACTTTACACGCTT 250
BSNT_04909___ 245 ACACTGAGCATGCATCTATCACAGACGGCGGAAACGAAACATCAGCATCA 294
||..|||.||.||.||.||.||.||.|..||..|.||||.|.|.||.||.
RBAM_030100__ 251 ACCTTGAACAAGCTTCCATTACGGATGAAGGTCAGGAAAAAACGGCTTCT 300
BSNT_04909___ 295 GAAATGGTACAAGCATTGGTAAACGACTACAAACAAATCAGCAGCGAATC 344
||||||||..||.||.||||..|.|||||.||||||||||||.|||||||
RBAM_030100__ 301 GAAATGGTGGAATCACTGGTTCAAGACTATAAACAAATCAGCCGCGAATC 350
BSNT_04909___ 345 TAAATTCGTGATCGGCCTGGCTGAAGAAAATCAAGACAATG------CGA 388
.|||||.||.||||||.|.||.||.||| ||| |||| |.|
RBAM_030100__ 351 AAAATTTGTCATCGGCATCGCCGAGGAA---CAA---AATGACCCGTCAA 394
BSNT_04909___ 389 CAGCGGACTTGTTTGTCGGATTAATTGAAGAAGTTGAAAAACAAGTGTGG 438
|.||.|||.||||||||||||||.|||||||||..||.||.||.||||||
RBAM_030100__ 395 CTGCCGACCTGTTTGTCGGATTAGTTGAAGAAGCGGACAAGCATGTGTGG 444
BSNT_04909___ 439 ATGCTTTCCTCTTACTTAGGATAA--- 462
|||||.||..|.|||||.|||.||
RBAM_030100__ 445 ATGCTGTCAGCCTACTTGGGAGAATAA 471
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