Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04889 and RBAM_030080

See DNA alignment / Visit BSNT_04889 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_04889.1.9828.seq
#    -bsequence pep-align/RBAM_030080___yusX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04889-RBAM_030080___yusX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04889-RBAM_030080___yusX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04889
# 2: RBAM_030080___yusX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 598
# Identity:     421/598 (70.4%)
# Similarity:   509/598 (85.1%)
# Gaps:           5/598 ( 0.8%)
# Score: 2251.5
# 
#
#=======================================

BSNT_04889         1 MALQGVGQRWDLDSFFKGGSQSEEFKGYIEKLSQSLRAFQDRTDAFQVPE     50
                     |||:|:.:.|||:|.|:|||:||||:.||::|...|.|||...:||.||.
RBAM_030080__      1 MALEGLKETWDLNSIFEGGSRSEEFQQYIQELKNHLSAFQHAVEAFTVPT     50

BSNT_04889        51 SPEEAEGLTALLDLFEQTSVKLQQAGAFVACLQAQNINDQKAIEHQALMN    100
                     ..:|:..|..|:|.||::::.::||||||.||||||.:||||.|.:|.:|
RBAM_030080__     51 HADESRELINLIDRFERSAIMIRQAGAFVGCLQAQNTHDQKANEWRARIN    100

BSNT_04889       101 RLSADFQSSLVTLDHKLVDVDQDVWNELLTKPGLRDISYILNERRQRVAE    150
                     :||:||:|:|||||..|..:|:.||.|||.||.|:|::|:|||||.||.|
RBAM_030080__    101 QLSSDFKSALVTLDDTLARIDEPVWEELLQKPELQDLTYVLNERRDRVKE    150

BSNT_04889       151 KLSPGKEKLIGNLAVDGYHAWSDLYNMVVGKMTIPYGENGENKQLSVGQA    200
                     |||..:|:||..|||||||||.||||..||:|.||:    |:|:||||||
RBAM_030080__    151 KLSASEERLIEGLAVDGYHAWGDLYNAAVGRMKIPF----EDKELSVGQA    196

BSNT_04889       201 ENMMDHQDRTVRKTVYERFRQAWESKQDIFSNTLNHLAGFRLETYKARGW    250
                     ||||.|.||.:|:.|::...:||:.::::|.:|||||||||.|.||||||
RBAM_030080__    197 ENMMAHPDRRIRRQVFKELNEAWKGEEELFGSTLNHLAGFRTEIYKARGW    246

BSNT_04889       251 ENVLKEPLQINRMKKETLDTMWQVITENKKPFVQFLNRKASMLGLEKLSW    300
                     ::.|:|||.||||||||||.||||||::||||.::||||||:||||:|:|
RBAM_030080__    247 KSALEEPLAINRMKKETLDVMWQVITDHKKPFAEYLNRKASLLGLERLNW    296

BSNT_04889       301 YDVEAPIGSDGKVYSYDEAANIITSQFSTFGKKLSSFTEKAFRDGWIEAE    350
                     |||:||||...|.|::|||||:|.|||||||||||:|:||||||.|||||
RBAM_030080__    297 YDVDAPIGEAPKEYTFDEAANLIVSQFSTFGKKLSAFSEKAFRDRWIEAE    346

BSNT_04889       351 DRSGKRVGGFCTSFPDSGESRIFMTFSGSASNVSTLAHELGHAFHQEAML    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_030080__    347 DRSGKRVGGFCTSFPDSGESRIFMTFSGSASNVSTLAHELGHAFHQEAML    396

BSNT_04889       401 DVRPLNRSYAMNVAETASTFAEMIVADATVQQAETREEKLVLLEDKVQRS    450
                     .||.|||:||||||||||||||||||||.::||||::|||.|||||:|:|
RBAM_030080__    397 QVRQLNRAYAMNVAETASTFAEMIVADAALKQAETKDEKLFLLEDKIQKS    446

BSNT_04889       451 VAFFMNIHARFLFETRFYEERKRGVVPASRLNELMEEAQREAYCNALEEY    500
                     ||.|||||||||||||||||||:|||||.:||||||.||:||:|::|.||
RBAM_030080__    447 VAMFMNIHARFLFETRFYEERKQGVVPAEKLNELMEAAQKEAFCDSLGEY    496

BSNT_04889       501 HPLFWASKLHFHITRVPFYNFPYTFGYLFSLGIYALALEEKNAFEEKYMA    550
                     ||.|||||||||||.||||||||||||||||||||.||.|...|||||:|
RBAM_030080__    497 HPHFWASKLHFHITGVPFYNFPYTFGYLFSLGIYARALRENADFEEKYIA    546

BSNT_04889       551 LLRDTASMTVEDLAMKHLGADITKRDFWENAIKLAVRDAETFLQMTES    598
                     ||.||||||||||||||||||:|:|.|||:|::|||:|.:.||::|| 
RBAM_030080__    547 LLCDTASMTVEDLAMKHLGADLTERSFWEDAVRLAVQDVQEFLELTE-    593


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04889 and RBAM_030080

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
