Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04888 and RBAM_030070

See DNA alignment / Visit BSNT_04888 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_04888___yusW.1.9828.seq
#    -bsequence pep-align/RBAM_030070___yusW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04888___yusW-RBAM_030070___yusW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04888___yusW-RBAM_030070___yusW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04888___yusW
# 2: RBAM_030070___yusW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:      92/145 (63.4%)
# Similarity:   115/145 (79.3%)
# Gaps:           0/145 ( 0.0%)
# Score: 480.0
# 
#
#=======================================

BSNT_04888___      1 MHLIRAAGAVCLAVVLIAGCRFNEDQQQAEGENTAVTQLKSVPYSNFSLR     50
                     |..||.||.:||.::||||||.||::::||.::|.|:..|.||||:||||
RBAM_030070__      1 MKWIRTAGVLCLTLMLIAGCRLNEEKREAEQDSTPVSSAKPVPYSSFSLR     50

BSNT_04888___     51 VSYGDGEHNRYEGIYTKNGTQEKAEIQDKLSGVNQEGEEALDEMKMILSE    100
                     ||||.||||||||:|.:....|||:|:||||||::|||||||||||||.|
RBAM_030070__     51 VSYGAGEHNRYEGLYERKDGHEKADIRDKLSGVHREGEEALDEMKMILGE    100

BSNT_04888___    101 LSVTDQMAETEVIHSVLAAFNLDSHYDHIDLKLKLKDGSIREIKK    145
                     |:|..:|.|:||:..||:||||||.|||..||||..||.:.||||
RBAM_030070__    101 LAVNSRMQESEVVRQVLSAFNLDSRYDHFYLKLKKNDGEMTEIKK    145


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