Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04888 and RBAM_030070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:26
# Commandline: needle
# -asequence dna-align/BSNT_04888___yusW.1.9828.seq
# -bsequence dna-align/RBAM_030070___yusW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04888___yusW-RBAM_030070___yusW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04888___yusW-RBAM_030070___yusW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04888___yusW
# 2: RBAM_030070___yusW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 457
# Identity: 316/457 (69.1%)
# Similarity: 316/457 (69.1%)
# Gaps: 38/457 ( 8.3%)
# Score: 987.5
#
#
#=======================================
BSNT_04888___ 1 ATGCATTTGATCAGAGCAGCCGGGGCTGTATGTCT--CGCAGTGGTTCTG 48
|||.|.|.|||||||.|.||.||.|.|.||||||| ||| ||.|.|||
RBAM_030070__ 1 ATGAAATGGATCAGAACGGCGGGCGTTTTATGTCTTACGC--TGATGCTG 48
BSNT_04888___ 49 ATTGCGGGCTGCCGTTTCAATGAAGACCAGCAGCAGGCAGAAGGAGAAAA 98
|||||.||||||||.||.||||||||..|.|.|.|.||.|||..|||.|.
RBAM_030070__ 49 ATTGCCGGCTGCCGATTGAATGAAGAAAAACGGGAAGCGGAACAAGACAG 98
BSNT_04888___ 99 TACAGCCG--TCACCCAGCTGAAGTCCGTTCCCTACAGCAATTTTTCGCT 146
.|||.||| |||.|| || ||||.|.|||||.|||||||..|||||.||
RBAM_030070__ 99 CACACCCGTATCATCC-GC-GAAGCCGGTTCCTTACAGCAGCTTTTCCCT 146
BSNT_04888___ 147 TCGTGTGAGCTACGGGGATGGTGAGCATAACCGTTATGAAGGAATCTATA 196
|||.||.||||||||.|..||.|||||||||||.||||||||..|.|||
RBAM_030070__ 147 TCGCGTCAGCTACGGAGCCGGAGAGCATAACCGCTATGAAGGTTTGTAT- 195
BSNT_04888___ 197 CAAAGA----ACGGAACTCAGGAAAAAGCGGAAATACAGGATAAGCTCTC 242
.||||| |||| |||.|||||.||.||.||.|.|||.||||||||
RBAM_030070__ 196 GAAAGAAAAGACGG---TCATGAAAAGGCTGACATCCGGGACAAGCTCTC 242
BSNT_04888___ 243 CGGTG-TCAATCAG-GAGGGAGAAGAAGCATTGGATGAGATGAAAATGAT 290
.||.| ||| ||| |||||.||.|||||..|.|||||.|||||.|||||
RBAM_030070__ 243 AGGGGTTCA--CAGAGAGGGCGAGGAAGCGCTTGATGAAATGAAGATGAT 290
BSNT_04888___ 291 TTTGAGCGAGCTTTCCGT-AACAGACCAAATGGCTGAAACAGAAGTGATA 339
..|..|.||.|||.|||| ||||| ||..|||...||||..||.||..|.
RBAM_030070__ 291 CCTCGGAGAACTTGCCGTAAACAG-CCGGATGCAGGAAAGCGAGGTCGTC 339
BSNT_04888___ 340 C-ACAGTGTGCTGGCAGCATTTAATCTGGACAGTCATTATGATCATATCG 388
| .||| |||||..|.||.||||||.|||||||.|..|||||.|||.|..
RBAM_030070__ 340 CGGCAG-GTGCTCTCGGCTTTTAATTTGGACAGCCGCTATGACCATTTTT 388
BSNT_04888___ 389 ATTTAAAATTGAAGCTGAAGGACGGCTCCATCAGA-------GAAATCAA 431
||.|.|||.||||...|||.||.|| ||| |||||.||
RBAM_030070__ 389 ATCTGAAACTGAAAAAGAATGATGG-------AGAAATGACGGAAATAAA 431
BSNT_04888___ 432 GAAGTAA 438
.||.|||
RBAM_030070__ 432 AAAATAA 438
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