Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04882 and RBAM_030000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence pep-align/BSNT_04882.1.9828.seq
# -bsequence pep-align/RBAM_030000___yusR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04882-RBAM_030000___yusR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04882-RBAM_030000___yusR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04882
# 2: RBAM_030000___yusR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 171/246 (69.5%)
# Similarity: 202/246 (82.1%)
# Gaps: 0/246 ( 0.0%)
# Score: 876.0
#
#
#=======================================
BSNT_04882 1 MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEKI 50
||:.:|.|||||||||||:||.:.||||||.|.:|||.|::|||:|.|.|
RBAM_030000__ 1 MNLQHKTALVTGGGTGIGRAACLALAKRGAAVVINYSHSKTEAEQTAEII 50
BSNT_04882 51 RKAGGQAFAIQADVSKNSDVQDMVQTIVKTYGPIDVLVNNASITRHIPMD 100
.||||.|..||||||.:...:|||......:|.:|:||||||||||||:.
RBAM_030000__ 51 IKAGGHAMTIQADVSIDKQARDMVNEAASRFGSLDLLVNNASITRHIPLH 100
BSNT_04882 101 DLEAATEDVWDELYAVNVKGMFFCARAVVPFMKKSKAGAIVNVGSIAGVT 150
|||:||::|||||:||||.|||.||||....|||.|:|||||||||||:|
RBAM_030000__ 101 DLESATKEVWDELFAVNVNGMFHCARAAASHMKKQKSGAIVNVGSIAGLT 150
BSNT_04882 151 GAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAGREE 200
|||||:||||||:|||||||||||||||:|||..|||||||||||.||||
RBAM_030000__ 151 GAGSSLPYAVSKAAVHGLTKSLAHALAPDIRVCCVAPGAVATRWWTGREE 200
BSNT_04882 201 KMKSMIGSLPLQCIAEPEEVAKLICSLVEQESLTGQIITIDSGQTL 246
.|..:.|||||:.||.||::.:||||::|||||||||||.|.|||:
RBAM_030000__ 201 TMYRLAGSLPLERIAAPEDIGELICSVLEQESLTGQIITADCGQTM 246
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