Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04876 and RBAM_029970

See DNA alignment / Visit BSNT_04876 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_04876___yusO.1.9828.seq
#    -bsequence pep-align/RBAM_029970___yusO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04876___yusO-RBAM_029970___yusO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04876___yusO-RBAM_029970___yusO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04876___yusO
# 2: RBAM_029970___yusO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     105/163 (64.4%)
# Similarity:   128/163 (78.5%)
# Gaps:           8/163 ( 4.9%)
# Score: 505.5
# 
#
#=======================================

BSNT_04876___      1 MKSADQLMSDIQLSLQALFQKIQPEMLESMEKQGVTPAQLFVLASLKKHG     50
                     ||:|||.:||||.|||.|.|.|||||:|||.|..||||||||||||||||
RBAM_029970__      1 MKNADQYVSDIQKSLQTLLQNIQPEMVESMAKHEVTPAQLFVLASLKKHG     50

BSNT_04876___     51 SLKISEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDE    100
                     |.|:||||||||||||||||||||||||.||.|.||.:||||||:|||.:
RBAM_029970__     51 SCKVSEIAERMEVKPSAVTLMADRLEQKGLIVRKHNQQDRRVIDISLTKK    100

BSNT_04876___    101 GDRKFEEVLAGRKAIMARYLSFLTEEEMLQAAHITAKLAQAAE-------    143
                     |:.|||:|:.|||||:||.||.||::|::|:.:|..|:|:|||       
RBAM_029970__    101 GETKFEDVVEGRKAILARNLSVLTDDELIQSVNIIRKVAEAAENTRLIKK    150

BSNT_04876___    144 -TDEKQNMKRGNG    155
                      |:.|:.:.:...
RBAM_029970__    151 KTNRKEELPKHEH    163


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