Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04874 and RBAM_029960

See DNA alignment / Visit BSNT_04874 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_04874___yusN.1.9828.seq
#    -bsequence pep-align/RBAM_029960___yusN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04874___yusN-RBAM_029960___yusN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04874___yusN-RBAM_029960___yusN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04874___yusN
# 2: RBAM_029960___yusN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      93/110 (84.5%)
# Similarity:   103/110 (93.6%)
# Gaps:           0/110 ( 0.0%)
# Score: 508.0
# 
#
#=======================================

BSNT_04874___      1 MNQQNQKISNPQTPVPTTSEMNDRDFVNELLTTEKYMTTAYCTALHEFSH     50
                     |.||||||:|||||||.|::|||||.||||||||||:|.:||||||||||
RBAM_029960__      1 MEQQNQKITNPQTPVPNTAQMNDRDLVNELLTTEKYITASYCTALHEFSH     50

BSNT_04874___     51 ESLYQDIQSIFDESQKAQRKLYDLMFQYGWYSVEAEDAQKLQQSYQKFQQ    100
                     ||||||||:||||||||||:|||:|||.||||:||.|.||||||||||:|
RBAM_029960__     51 ESLYQDIQAIFDESQKAQRRLYDVMFQNGWYSIEAADTQKLQQSYQKFRQ    100

BSNT_04874___    101 TIQQQSPYQQ    110
                     ||||||||||
RBAM_029960__    101 TIQQQSPYQQ    110


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