Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04869 and RBAM_029930

See DNA alignment / Visit BSNT_04869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_04869.1.9828.seq
#    -bsequence pep-align/RBAM_029930.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04869-RBAM_029930.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04869-RBAM_029930.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04869
# 2: RBAM_029930
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 48
# Identity:      38/48 (79.2%)
# Similarity:    42/48 (87.5%)
# Gaps:           2/48 ( 4.2%)
# Score: 193.0
# 
#
#=======================================

BSNT_04869         1 MVREKKNPSSAAVSAASVKGDAGPTQHYGGGKRTSQNQQYKKHNMEQS     48
                     |||.:|:||||||||||:||:|||.|.|||||||||||||||.|||  
RBAM_029930        1 MVRGRKDPSSAAVSAASMKGNAGPKQKYGGGKRTSQNQQYKKDNME--     46


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