Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04869 and RBAM_029930

See Amino acid alignment / Visit BSNT_04869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence dna-align/BSNT_04869.1.9828.seq
#    -bsequence dna-align/RBAM_029930.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04869-RBAM_029930.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04869-RBAM_029930.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04869
# 2: RBAM_029930
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     115/147 (78.2%)
# Similarity:   115/147 (78.2%)
# Gaps:           6/147 ( 4.1%)
# Score: 471.0
# 
#
#=======================================

BSNT_04869         1 ATGGTACGAGAGAAAAAAAATCCGTCTTCAGCGGCAGTCAGCGCGGCGAG     50
                     |||||.||||.||.||||.||||||||||.||.|||||.||||||||.||
RBAM_029930        1 ATGGTGCGAGGGAGAAAAGATCCGTCTTCTGCCGCAGTGAGCGCGGCCAG     50

BSNT_04869        51 CGTAAAGGGAGATGCCGGTCCGACTCAGCATTACGGCGGCGGAAAACGGA    100
                     |.|.||.|||.||||.||.||||..||..|.|||||||||||.|||||||
RBAM_029930       51 CATGAAAGGAAATGCGGGACCGAAGCAAAAATACGGCGGCGGCAAACGGA    100

BSNT_04869       101 CAAGTCAAAATCAGCAGTATAAAAAACATAACATGGAACAATCATAA    147
                     |.||.|||||||||||.|||||||||.|.|||||||||.||      
RBAM_029930      101 CGAGCCAAAATCAGCAATATAAAAAAGACAACATGGAATAA------    141


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