Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04868 and RBAM_029920

See DNA alignment / Visit BSNT_04868 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_04868___fadN.1.9828.seq
#    -bsequence pep-align/RBAM_029920___yusL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04868___fadN-RBAM_029920___yusL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04868___fadN-RBAM_029920___yusL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04868___fadN
# 2: RBAM_029920___yusL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 815
# Identity:     656/815 (80.5%)
# Similarity:   730/815 (89.6%)
# Gaps:          26/815 ( 3.2%)
# Score: 3419.0
# 
#
#=======================================

BSNT_04868___      1 MKEETSFIFFGQKMNDYSFNVQGGYLMHKHIRKAAVLGSGVMGSGIAAHL     50
                                               |||.|:||||||||||||||||||
RBAM_029920__      1 --------------------------MHKFIKKAAVLGSGVMGSGIAAHL     24

BSNT_04868___     51 ANIGIPVLLLDIVPNDLTKEEEKKGLTKDSPEMRSRLSRQAVKKLLKQKP    100
                     |||||||||||||||:|||:|.|||||.:|||:||||||.|::|||||||
RBAM_029920__     25 ANIGIPVLLLDIVPNELTKDEMKKGLTLESPEVRSRLSRSAMQKLLKQKP     74

BSNT_04868___    101 APLTSAKNTSYITPGNLEDDAEKLKEADWIIEVVVENLEVKKKIFALVDE    150
                     ||||||.|..|||.|||||||.:||:||||||||||||:|||:||:||||
RBAM_029920__     75 APLTSAANLDYITAGNLEDDAAQLKDADWIIEVVVENLDVKKQIFSLVDE    124

BSNT_04868___    151 HRKTGSIVSSNTSGISVQEMAEGRSDDFKAHFLGTHFFNPARYLKLLEII    200
                     :||.|||||||||||||.:||||||.||||||||||||||||||||||||
RBAM_029920__    125 YRKPGSIVSSNTSGISVTKMAEGRSADFKAHFLGTHFFNPARYLKLLEII    174

BSNT_04868___    201 PIKETDPDILKFMKAFGENVLGKGVVTAKDTPNFIANRIGTYGLLVTVQE    250
                     ||:|||||:|:||.:|.||.||||||.|||||||||||||||||||||:|
RBAM_029920__    175 PIQETDPDVLEFMTSFAENTLGKGVVIAKDTPNFIANRIGTYGLLVTVRE    224

BSNT_04868___    251 MLKGGYQVGEVDSITGPLIGRPKSATFRTLDVVGLDTFAHVARNVYDKAD    300
                     ||..|.::||||::||||||||||||||||||||||||||||:|||||||
RBAM_029920__    225 MLSSGCRIGEVDTVTGPLIGRPKSATFRTLDVVGLDTFAHVAKNVYDKAD    274

BSNT_04868___    301 GDEKEVFRLPSFMNDMLEKGWIGSKAGQGFYKKEGKTIYELDPVTLTYGE    350
                     |.||::|:||.||||||:..|:|||:|||||||||||||||||:|:||||
RBAM_029920__    275 GAEKDMFKLPEFMNDMLKNNWLGSKSGQGFYKKEGKTIYELDPLTMTYGE    324

BSNT_04868___    351 RTKMKSPALEAAKQAKGTKAKMKALIYSDDRAGRLLWNITSQTLLYSAEL    400
                     |:|||:|||||||||||.|.||||||||||||||||||||||||||||.|
RBAM_029920__    325 RSKMKTPALEAAKQAKGAKGKMKALIYSDDRAGRLLWNITSQTLLYSARL    374

BSNT_04868___    401 LGEIADDIHAIDQAMKWGFGWELGPFEMWDAIGLKQSAEKLEQLGADMPG    450
                     ||||||||.|||.||||||||||||||||||||:::|||:||:.||.:||
RBAM_029920__    375 LGEIADDIKAIDDAMKWGFGWELGPFEMWDAIGVRKSAERLEEEGAALPG    424

BSNT_04868___    451 WIKEMLDKGNETFYIKENGTVFYYDRGEYRAVKENKKRIHLQALKETKGV    500
                     |:|||||:|:||||:|||||.|||..|:|||||||.|||.||.|||||||
RBAM_029920__    425 WVKEMLDQGHETFYMKENGTPFYYSDGQYRAVKENPKRISLQTLKETKGV    474

BSNT_04868___    501 IAKNSGASLIDLGDDVALLEFHSKSNAIGLDIIQMIHKGLEETERNYKGL    550
                     |.||||||||||||||||||||:|||||||||||||...|||||||||||
RBAM_029920__    475 ITKNSGASLIDLGDDVALLEFHTKSNAIGLDIIQMIDNALEETERNYKGL    524

BSNT_04868___    551 VIGNQGKNFCVGANLAMILMEVQDDNFLEVDFVIRRFQETMMKIKYSAKP    600
                     ||||||::||.||||||||||.|||||:||||||||||:||:.|||||||
RBAM_029920__    525 VIGNQGRHFCAGANLAMILMEAQDDNFMEVDFVIRRFQQTMLNIKYSAKP    574

BSNT_04868___    601 VVAAPFGMTLGGGTEVCLPAARIQAASEAYMGLVESGVGLIPGGGGNKEL    650
                     ||||||||||||||||||||||:|||||:||||||:||||||||||||||
RBAM_029920__    575 VVAAPFGMTLGGGTEVCLPAARVQAASESYMGLVETGVGLIPGGGGNKEL    624

BSNT_04868___    651 YINHLRRGLDPMNAAMKTFETIAMAKVSVSAQEAREMNILKETDQISVNQ    700
                     |:|:|..|.:.|:||:|||||||:||||.||.|||:|.||...|:||:||
RBAM_029920__    625 YMNYLDGGSELMDAAIKTFETIALAKVSGSAHEARDMKILSAADRISMNQ    674

BSNT_04868___    701 DHLLYDAKQLAASLYDTGWRPPVKEKVKVPGETGYAALLLGAEQMKLSGY    750
                     ||||:|||||||||||:|:|||.::||||.||||.|||||||:||:.|||
RBAM_029920__    675 DHLLHDAKQLAASLYDSGYRPPARKKVKVTGETGCAALLLGADQMRRSGY    724

BSNT_04868___    751 ISEHDFKIAKKLAYVIAGGKVPFGTEVDEEYLLEIEREAFLSLAGEAKSQ    800
                     :|:||.|||||||:|||||:|||||||.||||||||||||||||||||||
RBAM_029920__    725 LSDHDMKIAKKLAHVIAGGRVPFGTEVSEEYLLEIEREAFLSLAGEAKSQ    774

BSNT_04868___    801 ARMQHMLVKGKPLRN    815
                     |||||||||||||||
RBAM_029920__    775 ARMQHMLVKGKPLRN    789


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04868 and RBAM_029920

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
