Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04862 and RBAM_029880

See DNA alignment / Visit BSNT_04862 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_04862___gcvH.1.9828.seq
#    -bsequence pep-align/RBAM_029880___gcvH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04862___gcvH-RBAM_029880___gcvH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04862___gcvH-RBAM_029880___gcvH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04862___gcvH
# 2: RBAM_029880___gcvH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:     115/127 (90.6%)
# Similarity:   120/127 (94.5%)
# Gaps:           0/127 ( 0.0%)
# Score: 597.0
# 
#
#=======================================

BSNT_04862___      1 MSIPKDLRYSGEHEWVKVEGEKARIGITHFAQSELGDIVFVELPEVGAEI     50
                     ||.|||:|||.||||||||..|||||||||||:|||||||||||||||||
RBAM_029880__      1 MSTPKDMRYSKEHEWVKVEDGKARIGITHFAQAELGDIVFVELPEVGAEI     50

BSNT_04862___     51 KADEPFGSVESVKTVSELYAPINGTVVEVNEDLDDSPEFVNESPYEKAWM    100
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_029880__     51 KADEPFGSVESVKTVSELYAPINGTVTEVNEDLDDSPEFVNESPYEKAWM    100

BSNT_04862___    101 IVVEPSDASEIEKLMTAEQYEEMTQED    127
                     |||||:||.|||.|||:|||:||||||
RBAM_029880__    101 IVVEPADAEEIENLMTSEQYDEMTQED    127


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