Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04862 and RBAM_029880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence dna-align/BSNT_04862___gcvH.1.9828.seq
# -bsequence dna-align/RBAM_029880___gcvH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04862___gcvH-RBAM_029880___gcvH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04862___gcvH-RBAM_029880___gcvH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04862___gcvH
# 2: RBAM_029880___gcvH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 319/385 (82.9%)
# Similarity: 319/385 (82.9%)
# Gaps: 2/385 ( 0.5%)
# Score: 1319.0
#
#
#=======================================
BSNT_04862___ 1 TTGAGCATACCAAAAGATTTGCGTTACTCAGGAGAACACGAGTGGGTAAA 50
.||||||.|||.||||||.|||||||.||...|||.|||||.|||||.||
RBAM_029880__ 1 ATGAGCACACCGAAAGATATGCGTTATTCCAAAGAGCACGAATGGGTCAA 50
BSNT_04862___ 51 AGTTGAAGGA-GAAAAAGCCAGAATCGGAATTACGCATTTTGCCCAGTCC 99
||||| |||| |.|||||||.|.|||||.|||||.|||||.||.||..||
RBAM_029880__ 51 AGTTG-AGGACGGAAAAGCCCGCATCGGGATTACACATTTCGCGCAAGCC 99
BSNT_04862___ 100 GAACTAGGCGACATCGTGTTTGTCGAACTTCCTGAAGTGGGCGCTGAAAT 149
|||||.|||||||||||.||||||||.|||||.|||||.|||||.|||||
RBAM_029880__ 100 GAACTTGGCGACATCGTCTTTGTCGAGCTTCCGGAAGTCGGCGCCGAAAT 149
BSNT_04862___ 150 CAAAGCGGACGAGCCATTCGGCAGTGTTGAATCCGTTAAAACGGTATCTG 199
.|||||||||||||||||||||||.||.||||||||.|||||.|||||.|
RBAM_029880__ 150 TAAAGCGGACGAGCCATTCGGCAGCGTGGAATCCGTCAAAACCGTATCCG 199
BSNT_04862___ 200 AGCTTTATGCACCGATTAACGGAACGGTTGTGGAAGTAAACGAAGATCTT 249
|.||.||.||||||||||||||||||||...||||||.||||||||.|||
RBAM_029880__ 200 AACTGTACGCACCGATTAACGGAACGGTGACGGAAGTGAACGAAGACCTT 249
BSNT_04862___ 250 GATGACAGTCCGGAATTCGTCAACGAATCTCCGTACGAAAAAGCATGGAT 299
|||||||||||.||||||||.|||||.||||||||.||||||||.|||||
RBAM_029880__ 250 GATGACAGTCCTGAATTCGTAAACGAGTCTCCGTATGAAAAAGCGTGGAT 299
BSNT_04862___ 300 GATCGTCGTTGAGCCATCTGACGCTTCTGAAATTGAAAAACTGATGACAG 349
|||||||||.||.||..||||.|||...|||||.|||||.||.|||||..
RBAM_029880__ 300 GATCGTCGTGGAACCGGCTGATGCTGAAGAAATCGAAAACCTCATGACTT 349
BSNT_04862___ 350 CAGAGCAATACGAAGAGATGACACAAGAAGACTAA 384
|.||||||||.||.||.||||||||.|||||||.|
RBAM_029880__ 350 CCGAGCAATATGACGAAATGACACAGGAAGACTGA 384
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