Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04853 and RBAM_029810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence pep-align/BSNT_04853___yusA.1.9828.seq
# -bsequence pep-align/RBAM_029810___yusA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04853___yusA-RBAM_029810___yusA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04853___yusA-RBAM_029810___yusA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04853___yusA
# 2: RBAM_029810___yusA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity: 239/274 (87.2%)
# Similarity: 253/274 (92.3%)
# Gaps: 3/274 ( 1.1%)
# Score: 1208.0
#
#
#=======================================
BSNT_04853___ 1 MKKLFLGALLLVFAGVMAACGSNNGAESGKKEIVVAATKTPHAEILKEAE 50
|||:.|.|||||||||:||||||. |.|||||||||||||||||||||
RBAM_029810__ 1 MKKIVLSALLLVFAGVLAACGSNG---SNKKEIVVAATKTPHAEILKEAE 47
BSNT_04853___ 51 PLLKEKGYTLKVKVLSDYKMYNKALADKEVDANYFQHIPYLEQEMKENTD 100
|||||||||||||||:|||||||||||.|||||||||:||||||||||.|
RBAM_029810__ 48 PLLKEKGYTLKVKVLNDYKMYNKALADNEVDANYFQHVPYLEQEMKENKD 97
BSNT_04853___ 101 YKLVNAGAVHLEPFGIYSKTYKSLKDLPDGATIILTNNVAEQGRMLAMLE 150
|||||||||||||||||:|.||||||||.|||||:|||||||||||||||
RBAM_029810__ 98 YKLVNAGAVHLEPFGIYTKKYKSLKDLPKGATIIMTNNVAEQGRMLAMLE 147
BSNT_04853___ 151 NAGLITLDSKVETVDATLKDIKKNPKNLEFKKVAPELTAKAYENKEGDAV 200
.|||||||.||:|::||.|:|.||||||.|||:|||||||||..:|||||
RBAM_029810__ 148 KAGLITLDPKVKTIEATTKNITKNPKNLTFKKIAPELTAKAYNEEEGDAV 197
BSNT_04853___ 201 FINVNYAIQNKLNPKKDAIEVESTKNNPYANIIAVRKGEEDSAKIKALME 250
||||||||||||||.||||:||||||||||||||||||:|.|.|||||||
RBAM_029810__ 198 FINVNYAIQNKLNPLKDAIQVESTKNNPYANIIAVRKGDEKSEKIKALME 247
BSNT_04853___ 251 VLHSKKIKDFIEKKYDGAVLPVSE 274
||||||||||||||||||||||||
RBAM_029810__ 248 VLHSKKIKDFIEKKYDGAVLPVSE 271
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