Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04845 and RBAM_029790

See DNA alignment / Visit BSNT_04845 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_04845___yurY.1.9828.seq
#    -bsequence pep-align/RBAM_029790___yurY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04845___yurY-RBAM_029790___yurY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04845___yurY-RBAM_029790___yurY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04845___yurY
# 2: RBAM_029790___yurY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     260/261 (99.6%)
# Similarity:   261/261 (100.0%)
# Gaps:           0/261 ( 0.0%)
# Score: 1317.0
# 
#
#=======================================

BSNT_04845___      1 MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029790__      1 MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAA     50

BSNT_04845___     51 IMGHPKYEVTKGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029790__     51 IMGHPKYEVTKGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNA    100

BSNT_04845___    101 DFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029790__    101 DFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSG    150

BSNT_04845___    151 GEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRSENFGC    200
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_029790__    151 GEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINRMRSENFGC    200

BSNT_04845___    201 LMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEAEGYDWIKQEL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029790__    201 LMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEAEGYDWIKQEL    250

BSNT_04845___    251 GIEDETVGQEA    261
                     |||||||||||
RBAM_029790__    251 GIEDETVGQEA    261


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