Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03901 and RBAM_029740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence pep-align/BSNT_03901___csn.1.9828.seq
# -bsequence pep-align/RBAM_029740___csn.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03901___csn-RBAM_029740___csn.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03901___csn-RBAM_029740___csn.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03901___csn
# 2: RBAM_029740___csn
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity: 240/278 (86.3%)
# Similarity: 254/278 (91.4%)
# Gaps: 7/278 ( 2.5%)
# Score: 1255.0
#
#
#=======================================
BSNT_03901___ 1 MKISM-------QKAAISLLVFTMFFTLMMSETVFAAGLNKDQKRRAEQL 43
||||: :|.|:|.|:||||||||||.||||||||||||||||||
RBAM_029740__ 1 MKISLKKKAGFWKKTAVSSLIFTMFFTLMMSGTVFAAGLNKDQKRRAEQL 50
BSNT_03901___ 44 TSIFENGTTEIQYGYVERLDDGRGYTCGRAGFTTATGDALEVVEVYTKAV 93
|||||||.|||||||||.||||||||||||||||||||||||||||||||
RBAM_029740__ 51 TSIFENGKTEIQYGYVEALDDGRGYTCGRAGFTTATGDALEVVEVYTKAV 100
BSNT_03901___ 94 PNNKLKKYLPELRRLAKEESDDTSNLKGFASAWKSLANDKEFRAAQDKVN 143
|||||||||||||||||:||||.||||||||||:||.|||.|||||||||
RBAM_029740__ 101 PNNKLKKYLPELRRLAKDESDDISNLKGFASAWRSLGNDKAFRAAQDKVN 150
BSNT_03901___ 144 DHLYYQPAMKRSDNAGLKTALARAVMYDTVIQHGDGDDPDSFYALIKRTN 193
|.|||||||:||:|||||||||:|||||||||||||||||||||||||||
RBAM_029740__ 151 DSLYYQPAMERSENAGLKTALAKAVMYDTVIQHGDGDDPDSFYALIKRTN 200
BSNT_03901___ 194 KKAGGSPKDGIDEKKWLNKFLDVRYDDLMNPANHDTRDEWRESVARVDVL 243
||.|||||||.||||||||||||||||||||::.||:||||||||||||.
RBAM_029740__ 201 KKMGGSPKDGTDEKKWLNKFLDVRYDDLMNPSDEDTQDEWRESVARVDVF 250
BSNT_03901___ 244 RSIAKENNYNLNGPIHVRSNEYGNFVIK 271
|.|.||.||||||||||||:|||||.|:
RBAM_029740__ 251 RDIVKEKNYNLNGPIHVRSSEYGNFTIQ 278
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