Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04835 and RBAM_029710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence pep-align/BSNT_04835___yurR.1.9828.seq
# -bsequence pep-align/RBAM_029710___yurR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04835___yurR-RBAM_029710___yurR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04835___yurR-RBAM_029710___yurR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04835___yurR
# 2: RBAM_029710___yurR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 267/372 (71.8%)
# Similarity: 313/372 (84.1%)
# Gaps: 1/372 ( 0.3%)
# Score: 1412.0
#
#
#=======================================
BSNT_04835___ 1 MKSYIIVGAGILGASTAYHLAKSGARVTVIDRKEPGQATDAAAGIVCPWL 50
||||:|:||||||||.||||||:||.|||||||.||||||||||||||||
RBAM_029710__ 1 MKSYLIIGAGILGASAAYHLAKAGAEVTVIDRKHPGQATDAAAGIVCPWL 50
BSNT_04835___ 51 SQRRNQDWYQLAKGGAQYYKDLIHQLEKDGESDTGYKRVGAISIHTDASK 100
||||||.||.:|||||:||:.||.|||.|||::|||::|||:|:|||..|
RBAM_029710__ 51 SQRRNQAWYAIAKGGARYYERLIQQLEADGETETGYQKVGAVSLHTDEKK 100
BSNT_04835___ 101 LDKMEERAYKRREDAPEIGDITRLSASETKKLFPILADGYESVHISGAAR 150
|.:|||||||||||||||||||||:..|||.|||.|::.|.:||:|||||
RBAM_029710__ 101 LSQMEERAYKRREDAPEIGDITRLTPEETKALFPALSEEYGAVHVSGAAR 150
BSNT_04835___ 151 VNGRALCRSLLSAAEKRGATVIKGNASLLFENGTVTGVQTDAKQFAADAV 200
||||||.::||:||.|.||.|....||:|.|:|.|.||:|..:...||.|
RBAM_029710__ 151 VNGRALRKALLNAAVKHGAAVYNEEASILTEDGAVIGVKTAERTLTADQV 200
BSNT_04835___ 201 IVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGSWPVVMPPSDQ 250
:|||||||.|:|:||||.|.||:|||||:|.|:...|||.|||||||:||
RBAM_029710__ 201 LVTAGAWARELLEPLGIRFSVSYQKAQIVHLELQGEDTGGWPVVMPPNDQ 250
BSNT_04835___ 251 YILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAA 300
|||:||:|||:||||||||.|: ||||||||..|:.:|||.|||||:|:.
RBAM_029710__ 251 YILAFDSGRIIAGATHENDTGM-DLRVTAGGLREIFAKALTVAPGLSDST 299
BSNT_04835___ 301 AVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMGPFLGAELA 350
.:||||||||||||||||:|.|||:.||..||||||||||.||:||||||
RBAM_029710__ 300 VIETRVGFRPFTPGFLPVIGKVPNISGLLVANGLGASGLTSGPYLGAELA 349
BSNT_04835___ 351 KLVLGKQTELDLSPYHPAGALA 372
||.||:|||:|||.|.|||||.
RBAM_029710__ 350 KLALGQQTEIDLSLYDPAGALE 371
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