Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04830 and RBAM_029650

See DNA alignment / Visit BSNT_04830 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_04830___yurN.1.9828.seq
#    -bsequence pep-align/RBAM_029650___yurN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04830___yurN-RBAM_029650___yurN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04830___yurN-RBAM_029650___yurN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04830___yurN
# 2: RBAM_029650___yurN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     257/296 (86.8%)
# Similarity:   280/296 (94.6%)
# Gaps:           4/296 ( 1.4%)
# Score: 1342.0
# 
#
#=======================================

BSNT_04830___      1 ----MVNQNKIIPYLFLVPALVFLLFVYIPIFENVFLSLFQWSSFSPEKT     46
                         :|::.:.||||||.|||:|||||||||.||||.|||:||||.||||
RBAM_029650__      1 MRISLVSRKRFIPYLFLAPALIFLLFVYIPIIENVFFSLFEWSSFQPEKT     50

BSNT_04830___     47 FIGLKNYVELFHDPVFYQALTNNVLYAVISIVCQVFGGLILAAVLEDKLV     96
                     |||||||::|||||||:.||.|||||||||::|||.|||||||||||:||
RBAM_029650__     51 FIGLKNYIDLFHDPVFFTALRNNVLYAVISLICQVGGGLILAAVLEDRLV    100

BSNT_04830___     97 RKWSPFFRTVFFLPVVISMTVIALLFDFIYNPETGLLNQLLQAIGLDQLT    146
                     |||||||||||||||||||||||||||||||||.|||||||:|:|||:||
RBAM_029650__    101 RKWSPFFRTVFFLPVVISMTVIALLFDFIYNPEIGLLNQLLEAVGLDELT    150

BSNT_04830___    147 RAWLGDDSTAMLSVIFVSQWQSVGYIAMLYIVSIQKIPDELYEAARLDGA    196
                     ||||||::|||||||||||||||||||||||||||.||.||||:|:||||
RBAM_029650__    151 RAWLGDENTAMLSVIFVSQWQSVGYIAMLYIVSIQSIPAELYESAQLDGA    200

BSNT_04830___    197 GKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGGPGNASEV    246
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029650__    201 GKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTGGGPGNASEV    250

BSNT_04830___    247 LSTFLYKSAFTEDMMGYASAIATVVLIITLALSLMQMKFFKTGKEE    292
                     |||||||||||:||||||||||||||::||||||:|||||||||||
RBAM_029650__    251 LSTFLYKSAFTKDMMGYASAIATVVLLLTLALSLIQMKFFKTGKEE    296


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