Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04826 and RBAM_029630

See DNA alignment / Visit BSNT_04826 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence pep-align/BSNT_04826___yurL.1.9828.seq
#    -bsequence pep-align/RBAM_029630___yurL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04826___yurL-RBAM_029630___yurL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04826___yurL-RBAM_029630___yurL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04826___yurL
# 2: RBAM_029630___yurL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     219/284 (77.1%)
# Similarity:   245/284 (86.3%)
# Gaps:           0/284 ( 0.0%)
# Score: 1137.0
# 
#
#=======================================

BSNT_04826___      1 MKLIAVGDNVVDYYQDQETFYPGGNALNVAVLAKRLGHESSYIGIVGNDE     50
                     |||||.|||||||||||||||||||||||||||:|||||:|||||:|:||
RBAM_029630__      1 MKLIAAGDNVVDYYQDQETFYPGGNALNVAVLARRLGHETSYIGILGSDE     50

BSNT_04826___     51 AAAHLLNVLKLEQVNADYIRQAHGENGMAIVTLDEQGDRIFVRSNKGGIQ    100
                     ||.|:|||||||:||||.||:|:||||||:|||||:|||||..|||||:|
RBAM_029630__     51 AADHVLNVLKLEKVNADLIRRAYGENGMAVVTLDERGDRIFAGSNKGGVQ    100

BSNT_04826___    101 SRLRLAFQEKDVSFISGHDLLHTSVYSRLENDLPQLCGLVPVSFDFSTNR    150
                     |||.|||||.|:|||:||||||||||||:|.|||.|.|.||:|||||..|
RBAM_029630__    101 SRLTLAFQENDISFIAGHDLLHTSVYSRIERDLPMLSGHVPISFDFSVKR    150

BSNT_04826___    151 EDDYLRRVCPYVTYAFFSGSDLSESECGELAKTAHGYGAKMVCMTRGGQG    200
                     ::.||..||||||||||||||||||||..||:.|.|:|||:||:|||..|
RBAM_029630__    151 DEAYLEAVCPYVTYAFFSGSDLSESECVRLAEKARGFGAKIVCLTRGEYG    200

BSNT_04826___    201 AILSAGDRVYHQPIVEADIIDTLGAGDSFIAGFLTAFCVKQDITYALRQA    250
                     |:||.|:||||||:|.|||||||||||||||||||.|...|||..||..|
RBAM_029630__    201 AVLSDGERVYHQPVVRADIIDTLGAGDSFIAGFLTDFFEHQDIRRALTAA    250

BSNT_04826___    251 AETAAKTCGVYGAFGYGYPYRLEDGGSSEKTRIL    284
                     |.|||||||.:||||||:|||...|.|||||||.
RBAM_029630__    251 AGTAAKTCGGFGAFGYGHPYRPGGGKSSEKTRIR    284


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