Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_04826 and RBAM_029630

See Amino acid alignment / Visit BSNT_04826 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence dna-align/BSNT_04826___yurL.1.9828.seq
#    -bsequence dna-align/RBAM_029630___yurL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04826___yurL-RBAM_029630___yurL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04826___yurL-RBAM_029630___yurL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04826___yurL
# 2: RBAM_029630___yurL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 871
# Identity:     657/871 (75.4%)
# Similarity:   657/871 (75.4%)
# Gaps:          32/871 ( 3.7%)
# Score: 2370.0
# 
#
#=======================================

BSNT_04826___      1 ATGAAGTTGATTGCGGTTGGAGATAATGTTGTAGATTACTACCAGGATCA     50
                     |||||..||||.||.|..|||||||||||.||||||||.||.||||||||
RBAM_029630__      1 ATGAAACTGATAGCTGCCGGAGATAATGTAGTAGATTATTATCAGGATCA     50

BSNT_04826___     51 AGAAACATTTTACCCGGGAGGAAATGCCTTAAACGTTGCTGTGCTTGCCA    100
                     .||.||.|||||||||||.||||||||.|||||.||.||.|||||||||.
RBAM_029630__     51 GGAGACGTTTTACCCGGGCGGAAATGCGTTAAATGTAGCCGTGCTTGCCC    100

BSNT_04826___    101 AGCGGCTCGGGCATGAGTCTTCCTATATCGGAATCGTCGGCAATGACGAA    150
                     .|||..|.||.||.||..||||.||||||||.||..||||||.|||.|||
RBAM_029630__    101 GGCGCTTAGGCCACGAAACTTCTTATATCGGGATTCTCGGCAGTGATGAA    150

BSNT_04826___    151 GCCGCGGCGCATCTGTTGAACGTTCTCAAGCTGGAGCAGGTCAATGCAGA    200
                     ||.||||..||..|.|||||.||.||.||.|||||..||||.|||||.||
RBAM_029630__    151 GCGGCGGATCACGTATTGAATGTGCTGAAACTGGAAAAGGTGAATGCCGA    200

BSNT_04826___    201 TTATATCCGCCAGGCGCATGGAGAAAACGGGATGGCGATTGTCACCCTTG    250
                     |...|||||||.|||..|.||||||||||||||||||.|.|||||.||||
RBAM_029630__    201 TCTGATCCGCCGGGCATACGGAGAAAACGGGATGGCGGTCGTCACGCTTG    250

BSNT_04826___    251 ATGAACAG-GGGGACCGCATTTTTGTCAGGTCAAATAAAGGCGGCATTCA    299
                     ||||| || ||||||.|.||.||||.|.|.|||||||||||||||.|.||
RBAM_029630__    251 ATGAA-AGAGGGGACAGGATATTTGCCGGATCAAATAAAGGCGGCGTGCA    299

BSNT_04826___    300 GTCCCGGCTTCGGCTCGCGTTCCAGGAGAAAGATGTATCTTTTATCAGCG    349
                     .||.||.||...||||||.||.||||||||.||..|.||.|||||...||
RBAM_029630__    300 ATCGCGTCTGACGCTCGCTTTTCAGGAGAATGACATCTCATTTATTGCCG    349

BSNT_04826___    350 GGCATGATCTGCTGCATACGAGCGTGTACAGCAGGCTTGAGAAC--GATC    397
                     |.||||||.||||||||||||||||.|||||||||.|  |||||  ||||
RBAM_029630__    350 GACATGATTTGCTGCATACGAGCGTATACAGCAGGAT--AGAACGTGATC    397

BSNT_04826___    398 TTCCGCAGCTGTGCGGGCTTGTCCCGGTCTCATTTGATTTTTCAACCAAT    447
                     |||||..||||.||||||.|||.|||.|.||.|||||.||.||....||.
RBAM_029630__    398 TTCCGATGCTGAGCGGGCATGTGCCGATTTCCTTTGACTTCTCTGTAAAA    447

BSNT_04826___    448 CGGGAGGATGATTATTTGAGGAG-GGTCTGTCCTTATGTGACGTATGCGT    496
                     ||.||.||.|..||||| ||.|| ||||||.||.||.|||||||||||||
RBAM_029630__    448 CGTGACGAAGCCTATTT-AGAAGCGGTCTGCCCGTACGTGACGTATGCGT    496

BSNT_04826___    497 TTTTTTCAGGAAGCGATTTGAGTG--AGTCGGAATGCGGTG-AGCTTGCC    543
                     |||||||.||.||.||||||||||  |||  ||||| .||| .|||||||
RBAM_029630__    497 TTTTTTCCGGGAGTGATTTGAGTGAAAGT--GAATG-TGTGCGGCTTGCC    543

BSNT_04826___    544 AAAACAGCTCATGGGTACGGAGCCAAAATGGTTTGTATGACCCGAGGGGG    593
                     .|||.|||.|..||.|.||||||.|||||.||.|||.||||   |.||||
RBAM_029630__    544 GAAAAAGCCCGCGGTTTCGGAGCGAAAATCGTCTGTCTGAC---AAGGGG    590

BSNT_04826___    594 CCAA---GGAGCAATCCTGTCTGCGGGTGATCGAGTCTATCATCAGCCGA    640
                     ..||   ||.||..|..|.||.|..||.||.||.|||||||||||||||.
RBAM_029630__    591 AGAATATGGCGCGGTGTTATCGGATGGGGAACGCGTCTATCATCAGCCGG    640

BSNT_04826___    641 TTGTGGAAGCTGATATAATAGATACACTTGGAGCGGGAGATTCTTTTATA    690
                     |.||...|||||||||||||||||||.|.||.|||||.|||||||||||.
RBAM_029630__    641 TGGTAAGAGCTGATATAATAGATACATTGGGCGCGGGTGATTCTTTTATC    690

BSNT_04826___    691 GCAGGCTTTTTGACTGCCTTTTGCGTGAAGCAGGATAT--AACGTACGCT    738
                     ||.||.|||.|.||.|..||||.||.|.|.||||||||  ..||..||||
RBAM_029630__    691 GCCGGGTTTCTTACCGATTTTTTCGAGCATCAGGATATTCGGCGAGCGCT    740

BSNT_04826___    739 T--TGCGCCAGGCCGCCGAAACGGCTGCGAAAACATGCGGTGTGTACGGA    786
                     |  |||    ||||||||..||||||||.|||||||||||.|.||.||||
RBAM_029630__    741 TACTGC----GGCCGCCGGGACGGCTGCCAAAACATGCGGAGGGTTCGGA    786

BSNT_04826___    787 GCTTTCGGCTATGGCTATCCTTATC--GCTTGGAGGACGGGGGAAGCAGT    834
                     ||.|||||.||.||..||||.|| |  ||..||.|| ||||..|||||||
RBAM_029630__    787 GCATTCGGTTACGGGCATCCCTA-CAGGCCGGGCGG-CGGGAAAAGCAGT    834

BSNT_04826___    835 GAAAAAACGAGAATACTATAA    855
                     ||||||||||||||||.||||
RBAM_029630__    835 GAAAAAACGAGAATACGATAA    855


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04826 and RBAM_029630

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
