Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04817 and RBAM_029580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence pep-align/BSNT_04817___yurG.1.9828.seq
# -bsequence pep-align/RBAM_029580___pucG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04817___yurG-RBAM_029580___pucG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04817___yurG-RBAM_029580___pucG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04817___yurG
# 2: RBAM_029580___pucG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity: 335/417 (80.3%)
# Similarity: 365/417 (87.5%)
# Gaps: 1/417 ( 0.2%)
# Score: 1772.0
#
#
#=======================================
BSNT_04817___ 1 MSGRRELCTPLRTIMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETM 50
|..|:|||.|.||||||||.|.:|||||.|..|::|||||||||||||||
RBAM_029580__ 1 MPTRKELCIPQRTIMTPGPTEAEPRVLRAMGAPIIGQFDPAFTGIMNETM 50
BSNT_04817___ 51 EMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL 100
:||||||||:|||||||||||||||||||||||||.|.||:|||||||||
RBAM_029580__ 51 QMLRELFQTENRWAYPIDGTSRAGIEAVLASVIEPGDSVLVPIYGRFGYL 100
BSNT_04817___ 101 LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTG 150
||||||||||:||.:||||||||.|::||.|:||:.||||||||||||||
RBAM_029580__ 101 LTEIAERYGADVHTIECEWGTVFRPDEIISEMKKISPKIVAMVHGETSTG 150
BSNT_04817___ 151 RIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCL 200
||||||.||||||.:|||||||||||||||.||.|||||||.||||||||
RBAM_029580__ 151 RIHPLKEIGEACRAQDALFIVDAVATIGGCAVKTDEWKIDAVIGGTQKCL 200
BSNT_04817___ 201 SVPSGMAPITYNERVADVIAARKKVERGIATQADSEALSGNRPITSNYFD 250
||||||||||||:|.|.||||||||||||||.||.:.|||:|||||||||
RBAM_029580__ 201 SVPSGMAPITYNDRTAAVIAARKKVERGIATAADGKMLSGHRPITSNYFD 250
BSNT_04817___ 251 LSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLEARFERHRHHEA 300
||||||||||||||||||||.||||||||||||||||||.||.|||.||.
RBAM_029580__ 251 LSQLEDYWSERRLNHHTEATAMLYALREGVRLVLEEGLEERFRRHRRHEK 300
BSNT_04817___ 301 ALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGGIDGDSVRDMLLAQFGIEI 350
||.||:.||||.||||...|:||||||:||...||:|:|.|||:||||||
RBAM_029580__ 301 ALMAGLAAMGLDLFGDPEAKLPVVTCVKIPPEADGESIRRMLLSQFGIEI 350
BSNT_04817___ 351 ASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNAGIEAGKAL 400
|||||||.|||||||||||||||||||||||||||||:||...::||:||
RBAM_029580__ 351 ASSFGPLQGKIWRIGTMGYSCRKENVLFVLAGLEAVLIRHGVAVKAGEAL 400
BSNT_04817___ 401 QAALNVYENAGRQAAV- 416
|||||:|:.......:
RBAM_029580__ 401 QAALNIYDLPAETGVLS 417
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