Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04796 and RBAM_029500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence pep-align/BSNT_04796___pucH.1.9828.seq
# -bsequence pep-align/RBAM_029500___pucH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04796___pucH-RBAM_029500___pucH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04796___pucH-RBAM_029500___pucH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04796___pucH
# 2: RBAM_029500___pucH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 313/454 (68.9%)
# Similarity: 369/454 (81.3%)
# Gaps: 8/454 ( 1.8%)
# Score: 1670.0
#
#
#=======================================
BSNT_04796___ 1 MAYDMVIKGAKAVTPDGVIEAEIAVQNGVIAEIGSDIEASGTEIIQADGK 50
||||:::||||||...|...|:|||::|.||.||..|:.:..:::||||.
RBAM_029500__ 1 MAYDVIVKGAKAVRKGGTERADIAVKDGKIALIGPGIDENAEQVVQADGM 50
BSNT_04796___ 51 YVFPGVIDCHVHFNEPGREDWEGFETGSQMMAAGGCTTYFDMPLNCIPST 100
|||||.:||||||||||||:|||.||||.|:||||||:||||||||||||
RBAM_029500__ 51 YVFPGAVDCHVHFNEPGREEWEGIETGSNMLAAGGCTSYFDMPLNCIPST 100
BSNT_04796___ 101 VTAEHLLAKAELGRQKSAVDFALWGGLVPGHIEDIRPMAEAGAIGFKAFL 150
||||:||||||:..:||||||||||||:||:.|.||||||||||||||||
RBAM_029500__ 101 VTAENLLAKAEIAERKSAVDFALWGGLMPGYTEHIRPMAEAGAIGFKAFL 150
BSNT_04796___ 151 SKSGTDEFRSVDERTLLKGMAEIAAAGKILALHAESDAITSYLQMVLANK 200
||||||||:|.|||||||||.||||.||:|||||||||:|.:|:...|.:
RBAM_029500__ 151 SKSGTDEFQSADERTLLKGMKEIAACGKVLALHAESDALTRFLEAEYALQ 200
BSNT_04796___ 201 GKVDADAYAASRPEEAEVEAVYRTIQYAKVTGCPVHFVHISTAKAVRLIR 250
||:|..|||:|||||||.|||.|.|:||:.|||.:|||||||.:||..|:
RBAM_029500__ 201 GKIDVRAYASSRPEEAECEAVQRAIEYARATGCALHFVHISTKRAVLSIQ 250
BSNT_04796___ 251 EAKQEGLDVSVETCPHYVLFSHDDLRQRGSVAKCAPPLRSLQSKETLIET 300
:||::||||:|||||||:|||.:|..::|:.|||||||||...||.||..
RBAM_029500__ 251 QAKKDGLDVTVETCPHYLLFSFEDFLKKGAAAKCAPPLRSEADKEELIGV 300
BSNT_04796___ 301 LIAGDIDMVSSDHSPCRPSLKREDNMFLSWGGISGGQFTLLGMLELALEH 350
|..|.|||||||||||.||||||||||||||||||||||||||::||::|
RBAM_029500__ 301 LAEGLIDMVSSDHSPCHPSLKREDNMFLSWGGISGGQFTLLGMIQLAIDH 350
BSNT_04796___ 351 QIPFETIAEWTAAAPAKRFGLQKKGRLEAGCDADFVLVSMEPYTVTRESM 400
.||||.:|.|||.||||||||..|||||.|.||||.:|..||:|||:|:|
RBAM_029500__ 351 GIPFEHVARWTAEAPAKRFGLTNKGRLEEGFDADFAIVRPEPFTVTKETM 400
BSNT_04796___ 401 FAKHKKSIYEGHTFPCSIWTTYSKGRCVYND-GEKVTEIDGALVVPS--- 446
|:|||:|:|||||||..|..|||||||||.| |.|.:...|..:.||
RBAM_029500__ 401 FSKHKQSLYEGHTFPYRIAATYSKGRCVYQDGGRKQSGAFGTFLKPSEIK 450
BSNT_04796___ 446 ---- 446
RBAM_029500__ 451 EPIL 454
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